RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 UBQLN1Q9UMX0 589 aaKnown RBP18.41■□□□□ 0.54
SMC6-206ENST00000446852 PPP1R26Q5T8A7 1209 aaPredicted RBP18.4■□□□□ 0.54
SMC6-206ENST00000446852 ACOT1Q86TX2 421 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 NME8Q8N427 588 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 SMG8Q8ND04 991 aaKnown RBP18.4■□□□□ 0.54
SMC6-206ENST00000446852 KIAA1257Q9ULG3 409 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 IPPQ9Y573 584 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 PIK3R2O00459 728 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 PGK1P00558 417 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 ATF7P17544 494 aaPredicted RBP18.4■□□□□ 0.54
SMC6-206ENST00000446852 IL1R2P27930 398 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 PSMC4P43686 418 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 GJA9P57773 515 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 CCNG2Q16589 344 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 SOWAHAQ2M3V2 549 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 GOLGA7BQ2TAP0 167 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 XKR4Q5GH76 650 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 KAZNQ674X7 775 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 CXCL17Q6UXB2 119 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 SPOCD1Q6ZMY3 1216 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 FAM228AQ86W67 206 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 ARRDC4Q8NCT1 418 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 PARP2Q9UGN5 583 aa18.4■□□□□ 0.54
SMC6-206ENST00000446852 ABT1Q9ULW3 272 aaKnown RBP18.4■□□□□ 0.54
SMC6-206ENST00000446852 PIRO00625 290 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 HCRTO43612 131 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 IVDP26440 423 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 SOX4Q06945 474 aaPredicted RBP18.39■□□□□ 0.53
SMC6-206ENST00000446852 PTK6Q13882 451 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 PIWIL1Q96J94 861 aaKnown RBP18.39■□□□□ 0.53
SMC6-206ENST00000446852 CCDC114Q96M63 670 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 GOLGA2P5Q9HBQ8 144 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 LRRC4CQ9HCJ2 640 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 HOMER3Q9NSC5 361 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 FAM49BQ9NUQ9 324 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 NEU2Q9Y3R4 380 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 ERICH4A6NGS2 130 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 E5RJQ4 531 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 TULP2O00295 520 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 SPTLC1O15269 473 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 TRIM32Q13049 653 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 TRIP13Q15645 432 aaPredicted RBP18.39■□□□□ 0.53
SMC6-206ENST00000446852 SMTNL2Q2TAL5 461 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 FAM102AQ5T9C2 384 aaPredicted RBP18.39■□□□□ 0.53
SMC6-206ENST00000446852 POLNQ7Z5Q5 900 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 TTC30AQ86WT1 665 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 ATL2Q8NHH9 583 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 LPIN3Q9BQK8 851 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 MTG1Q9BT17 334 aaPredicted RBP18.39■□□□□ 0.53
SMC6-206ENST00000446852 ASIC3Q9UHC3 531 aa18.39■□□□□ 0.53
SMC6-206ENST00000446852 CASP8AP2Q9UKL3 1982 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 hCG_1818297A0A087WSY0 165 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 LRRD1A4D1F6 860 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 C3orf70A6NLC5 250 aaPredicted RBP18.38■□□□□ 0.53
SMC6-206ENST00000446852 KCNE1P15382 129 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 CDKN2BP42772 138 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 FLT3LGP49771 235 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 FCGRTP55899 365 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 NBPF20Q3BBV1 942 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 PKDCCQ504Y2 493 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 FBXO47Q5MNV8 452 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 UBAP2Q5T6F2 1119 aaKnown RBP18.38■□□□□ 0.53
SMC6-206ENST00000446852 TAF2Q6P1X5 1199 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 SESTD1Q86VW0 696 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 GRK7Q8WTQ7 553 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 WNT8BQ93098 351 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 DPEP3Q9H4B8 488 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 TMBIM4Q9HC24 238 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 DDX56Q9NY93 547 aaKnown RBP18.38■□□□□ 0.53
SMC6-206ENST00000446852 GTF2IRD1Q9UHL9 959 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 GAS8O95995 478 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 PTPN7P35236 360 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 CETN2P41208 172 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 PMS2P54278 862 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 COPS2P61201 443 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 CAP1Q01518 475 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 TFDP3Q5H9I0 405 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 KCNT1Q5JUK3 1230 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 SPDYCQ5MJ68 293 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 TRNP1Q6NT89 227 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 FAM183BPQ6ZVS7 135 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 SYDE1Q6ZW31 735 aaPredicted RBP18.38■□□□□ 0.53
SMC6-206ENST00000446852 IPO4Q8TEX9 1081 aaKnown RBP18.38■□□□□ 0.53
SMC6-206ENST00000446852 KBTBD7Q8WVZ9 684 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 ATP6V1G3Q96LB4 118 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 ZWILCHQ9H900 591 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 WHRNQ9P202 907 aa18.38■□□□□ 0.53
SMC6-206ENST00000446852 MTRF1LQ9UGC7 380 aaKnown RBP18.38■□□□□ 0.53
SMC6-206ENST00000446852 CAPN2P17655 700 aa18.37■□□□□ 0.53
SMC6-206ENST00000446852 RGS7P49802 495 aa18.37■□□□□ 0.53
SMC6-206ENST00000446852 MRPS6P82932 125 aaKnown RBP18.37■□□□□ 0.53
SMC6-206ENST00000446852 DNAJC21Q5F1R6 531 aaKnown RBP18.37■□□□□ 0.53
SMC6-206ENST00000446852 GDF6Q6KF10 455 aaPredicted RBP18.37■□□□□ 0.53
SMC6-206ENST00000446852 PMF1Q6P1K2 205 aa18.37■□□□□ 0.53
SMC6-206ENST00000446852 KPNA6O60684 536 aa18.37■□□□□ 0.53
SMC6-206ENST00000446852 TJP3O95049 919 aa18.37■□□□□ 0.53
SMC6-206ENST00000446852 CD4P01730 458 aa18.37■□□□□ 0.53
SMC6-206ENST00000446852 FGFR1P11362 822 aa18.37■□□□□ 0.53
SMC6-206ENST00000446852 CALCOCO2Q13137 446 aa18.37■□□□□ 0.53
SMC6-206ENST00000446852 STILQ15468 1287 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms