RNA–Protein interactions for RNA: ENST00000442139.5

ERGIC3-208, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-208ENST00000442139 ZNF197O14709 1029 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 MED7O43513 233 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 MICAL2O94851 1124 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 OR4Q2P0C623 313 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 CCDC172P0C7W6 258 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 VDRP11473 427 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 ATP1A3P13637 1013 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 SLC9A1P19634 815 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 LRMPQ12912 555 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 TAF12Q16514 161 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 MEA1Q16626 185 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 MDH1BQ5I0G3 518 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 PHLDB3Q6NSJ2 640 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 ACOT1Q86TX2 421 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 LRRTM3Q86VH5 581 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 UBR7Q8N806 425 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 ATAD1Q8NBU5 361 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 NEK11Q8NG66 645 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 SMG7Q92540 1137 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 MYLPFQ96A32 169 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 C8orf48Q96LL4 319 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 PCMTD1Q96MG8 357 aaPredicted RBP13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 HEXIM2Q96MH2 286 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 HNRNPABQ99729 332 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 S1PR5Q9H228 398 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 CRTAC1Q9NQ79 661 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 COMMD8Q9NX08 183 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 PRKAG3Q9UGI9 489 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 YIPF1Q9Y548 306 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 PCDHB4Q9Y5E5 795 aa13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 NUP210Q8TEM1 1887 aaPredicted RBP13.22□□□□□ -0.29
ERGIC3-208ENST00000442139 CLUHO75153 1309 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 SOBPA7XYQ1 873 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 SPATA31D3P0C874 917 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 CSH1P0DML2 217 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 CSH2P0DML3 217 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 UCHL3P15374 230 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 PTPN2P17706 415 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 RAD23BP54727 409 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 UBASH3AP57075 661 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 PSMC1P62191 440 aaKnown RBP13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 FANCCQ00597 558 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 TWF1Q12792 350 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 CBX2Q14781 532 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 SMAD2Q15796 467 aaKnown RBP13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 SGO2Q562F6 1265 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 RARS2Q5T160 578 aaKnown RBP13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 KLHDC7AQ5VTJ3 777 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 ARHGAP17Q68EM7 881 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 PTCRAQ6ISU1 281 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 TMEM270Q6UE05 265 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 SPATA31D4Q6ZUB0 917 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 RRAGAQ7L523 313 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 APTXQ7Z2E3 356 aaKnown RBP13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 SHC3Q92529 594 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 SUSD6Q92537 303 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 CYFIP2Q96F07 1278 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 TMEM209Q96SK2 561 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 SEPT5Q99719 369 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 ARID3AQ99856 593 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 MED10Q9BTT4 135 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 NUP58Q9BVL2 599 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 EDEM3Q9BZQ6 932 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 WDR6Q9NNW5 1121 aaKnown RBP13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 DMAP1Q9NPF5 467 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 CEP72Q9P209 647 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 HESX1Q9UBX0 185 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 MYO6Q9UM54 1294 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 USTQ9Y2C2 406 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 NR2E1Q9Y466 385 aa13.21□□□□□ -0.29
ERGIC3-208ENST00000442139 GRXCR2A6NFK2 248 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 H3BQ06 376 aaPredicted RBP13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 MBTPS2O43462 519 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 ATP2C2O75185 946 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 LRRN2O75325 713 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 SEC24AO95486 1093 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 FAM200BP0CF97 657 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 KRT5P13647 590 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 ACO1P21399 889 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 GRIK1P39086 918 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 PPP3CCP48454 512 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 ZNF132P52740 706 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 EPHA5P54756 1037 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 PTK2Q05397 1052 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 DLX2Q07687 328 aaPredicted RBP13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 KCNMA1Q12791 1236 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 SYCP1Q15431 976 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 PABPC1LQ4VXU2 614 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 FIGNQ5HY92 759 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 CYP4A22Q5TCH4 519 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 TMC5Q6UXY8 1006 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 ARHGEF19Q8IW93 802 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 FUKQ8N0W3 1084 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 SLC4A11Q8NBS3 891 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 RBBP8NLQ8NC74 664 aaPredicted RBP13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
ERGIC3-208ENST00000442139 PSMG2Q969U7 264 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms