RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 FRMPD3Q5JV73 1810 aa13.89□□□□□ -0.19
CPSF4-206ENST00000441580 KPNA7A9QM74 516 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 DPYSL4O14531 572 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 NDC80O14777 642 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 PPEF2O14830 753 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 RNF40O75150 1001 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 TJP3O95049 919 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 GJB6O95452 261 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 RALAP11233 206 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 WARSP23381 471 aaKnown RBP13.88□□□□□ -0.19
CPSF4-206ENST00000441580 OGDHQ02218 1023 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 NFX1Q12986 1120 aaKnown RBP13.88□□□□□ -0.19
CPSF4-206ENST00000441580 PTK6Q13882 451 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 PPP1R7Q15435 360 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 ZFYVE27Q5T4F4 411 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 FAM102AQ5T9C2 384 aaPredicted RBP13.88□□□□□ -0.19
CPSF4-206ENST00000441580 TTC27Q6P3X3 843 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 DPH6Q7L8W6 267 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 LIMS2Q7Z4I7 341 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 TMC3Q7Z5M5 1100 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 ADGRF2Q8IZF7 708 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 TSEN2Q8NCE0 465 aaKnown RBP13.88□□□□□ -0.19
CPSF4-206ENST00000441580 APPL2Q8NEU8 664 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 OR6B3Q8NGW1 331 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 TNIP3Q96KP6 325 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 PPP1R10Q96QC0 940 aaKnown RBP13.88□□□□□ -0.19
CPSF4-206ENST00000441580 SH3GL2Q99962 352 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 SNX25Q9H3E2 840 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 PLEKHA4Q9H4M7 779 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 FAM105AQ9NUU6 356 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 SRRDQ9UH36 339 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 EFR3BQ9Y2G0 817 aa13.88□□□□□ -0.19
CPSF4-206ENST00000441580 TCRBV7S2A1N4TA0A589 114 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 A8MXQ7 604 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 POLR3GO15318 223 aaPredicted RBP13.87□□□□□ -0.19
CPSF4-206ENST00000441580 HUS1O60921 280 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 RNF8O76064 485 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 TOMM70O94826 608 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 ASGR1P07306 291 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 CTSHP09668 335 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 FAM153BP0C7A2 387 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 GPD1P21695 349 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 PCK1P35558 622 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 GGCXP38435 758 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 SLC25A11Q02978 314 aaKnown RBP13.87□□□□□ -0.19
CPSF4-206ENST00000441580 KRT17Q04695 432 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 BST2Q10589 180 aaKnown RBP13.87□□□□□ -0.19
CPSF4-206ENST00000441580 CALCOCO2Q13137 446 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 PTK7Q13308 1070 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 CCNG2Q16589 344 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 SOWAHAQ2M3V2 549 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 FAM153CQ494X1 144 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 PKDCCQ504Y2 493 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 MAP3K21Q5TCX8 1036 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 DRICH1Q6PGQ1 229 aaPredicted RBP13.87□□□□□ -0.19
CPSF4-206ENST00000441580 SPOCD1Q6ZMY3 1216 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 RNF180Q86T96 592 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 TMEM130Q8N3G9 435 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 BBOF1Q8ND07 529 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 HINFPQ9BQA5 517 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 TRAIPQ9BWF2 469 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 ASNSD1Q9NWL6 643 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 KLK14Q9P0G3 267 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 VPS18Q9P253 973 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 DDX20Q9UHI6 824 aaKnown RBP13.87□□□□□ -0.19
CPSF4-206ENST00000441580 FAM153AQ9UHL3 310 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 FAN1Q9Y2M0 1017 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 GIT1Q9Y2X7 761 aa13.87□□□□□ -0.19
CPSF4-206ENST00000441580 TSC2P49815 1807 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 hCG_1818297A0A087WSY0 165 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 LRRD1A4D1F6 860 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 GOLGA6L10A6NI86 522 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 F8VP50 259 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 PTGESO14684 152 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 PPFIA2O75334 1257 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 LRCH4O75427 683 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 SYF2O95926 243 aaKnown RBP13.86□□□□□ -0.19
CPSF4-206ENST00000441580 SKIP12755 728 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 PAX3P23760 479 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 CCND3P30281 292 aaPredicted RBP13.86□□□□□ -0.19
CPSF4-206ENST00000441580 RFC1P35251 1148 aaPredicted RBP13.86□□□□□ -0.19
CPSF4-206ENST00000441580 ACADSBP45954 432 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 ZNF143P52747 638 aaPredicted RBP13.86□□□□□ -0.19
CPSF4-206ENST00000441580 CAV1Q03135 178 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 TRIM32Q13049 653 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 PTGISQ16647 500 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 TFDP3Q5H9I0 405 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 CCSAPQ6IQ19 270 aaPredicted RBP13.86□□□□□ -0.19
CPSF4-206ENST00000441580 CEP128Q6ZU80 1094 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 FAM183BPQ6ZVS7 135 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 ACOT1Q86TX2 421 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 DDX42Q86XP3 938 aaKnown RBP eCLIP13.86□□□□□ -0.19
CPSF4-206ENST00000441580 ZDHHC14Q8IZN3 488 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 CRYBG2Q8N1P7 616 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 JOSD2Q8TAC2 188 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 SPATA18Q8TC71 538 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 KBTBD7Q8WVZ9 684 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 EXOC4Q96A65 974 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 CCDC114Q96M63 670 aa13.86□□□□□ -0.19
CPSF4-206ENST00000441580 ZIM3Q96PE6 472 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms