RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 MFSD7Q6UXD7 560 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 HAUS6Q7Z4H7 955 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 SREK1Q8WXA9 508 aaKnown RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 CD101Q93033 1021 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 OLFM3Q96PB7 478 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 OXCT2Q9BYC2 517 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-209ENST00000439886 DAGLAQ9Y4D2 1042 aa12.24□□□□□ -0.45
SMPD4-209ENST00000439886 DNALI1O14645 258 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-209ENST00000439886 ZMPSTE24O75844 475 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 CLK2P49760 499 aaKnown RBP12.23□□□□□ -0.45
SMPD4-209ENST00000439886 NRLP54845 237 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 LMNB2Q03252 620 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 BMPR2Q13873 1038 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 HIC1Q14526 733 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 CCNG2Q16589 344 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 FAM182BQ5T319 152 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 KCNN1Q92952 543 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 PPP1R36Q96LQ0 422 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 CEP295NLQ96MC4 621 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 TIPINQ9BVW5 301 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 FAM192AQ9GZU8 254 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 TSC22D4Q9Y3Q8 395 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 BCORQ6W2J9 1755 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 COL5A2P05997 1499 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-209ENST00000439886 CYP1A1P04798 512 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-209ENST00000439886 CYP1A2P05177 515 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 VAV1P15498 845 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 GPSM2P81274 684 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 SPIRE1Q08AE8 756 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 CDC16Q13042 620 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 PEX6Q13608 980 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 CHI3L2Q15782 390 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 SNRNP35Q16560 246 aaKnown RBP12.23□□□□□ -0.45
SMPD4-209ENST00000439886 KRT39Q6A163 491 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 NUDCD3Q8IVD9 361 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 PDIK1LQ8N165 341 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 GALNT4Q8N4A0 578 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 PFDN4Q9NQP4 134 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 ARHGEF38Q9NXL2 777 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 PCSK1NQ9UHG2 260 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 ACTL7BQ9Y614 415 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 MAD1L1Q9Y6D9 718 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 BCL9O00512 1426 aa12.23□□□□□ -0.45
SMPD4-209ENST00000439886 TMEM247A6NEH6 219 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 F5H6K3 240 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 HNRNPCL1O60812 293 aaKnown RBP12.22□□□□□ -0.45
SMPD4-209ENST00000439886 FAM155BO75949 473 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 TCF4P15884 667 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 GALK1P51570 392 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 SOX10P56693 466 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 FAAP100Q0VG06 881 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 PDE1CQ14123 709 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-209ENST00000439886 CYTH1Q15438 398 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 XKR9Q5GH70 373 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 DPY19L2Q6NUT2 758 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 ULK2Q8IYT8 1036 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 SIX5Q8N196 739 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 OLIG1Q8TAK6 271 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 DENND1AQ8TEH3 1009 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 FAM213AQ9BRX8 229 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 SYT11Q9BT88 431 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 POLR3CQ9BUI4 534 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-209ENST00000439886 GRIP2Q9C0E4 1043 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 NOCTQ9UK39 431 aaKnown RBP12.22□□□□□ -0.45
SMPD4-209ENST00000439886 FAF1Q9UNN5 650 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-209ENST00000439886 ATF5Q9Y2D1 282 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-209ENST00000439886 AK5Q9Y6K8 562 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 ADAMTS7Q9UKP4 1686 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 CFLARO15519 480 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 DKC1O60832 514 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMPD4-209ENST00000439886 ADRB2P07550 413 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 ARP10275 920 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 PRELPP51888 382 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 ARPC4P59998 168 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 CENPCQ03188 943 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 AP3B2Q13367 1082 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 PSMD6Q15008 389 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 R3HDM1Q15032 1099 aaKnown RBP12.22□□□□□ -0.45
SMPD4-209ENST00000439886 BMT2Q1RMZ1 405 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 PABPC1LQ4VXU2 614 aaKnown RBP12.22□□□□□ -0.45
SMPD4-209ENST00000439886 FAXCQ5TGI0 409 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 SYDE2Q5VT97 1194 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 MCOLN2Q8IZK6 566 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 SLC43A3Q8NBI5 491 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 FBXL13Q8NEE6 735 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 SHKBP1Q8TBC3 707 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 GATA6Q92908 595 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 PPP2R3CQ969Q6 453 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 CNBD2Q96M20 576 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 CACNA1SQ13698 1873 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 UMODL1Q5DID0 1318 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 MYOCOSA0A1B0GUC4 107 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 PRR5-ARHGAP8B1AHC4 643 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 CYB561D2O14569 222 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 PRPF4O43172 522 aaKnown RBP eCLIP12.22□□□□□ -0.451e-6■□□□□ 8.5
SMPD4-209ENST00000439886 ARHGAP8P85298 464 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 NFIAQ12857 509 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 NCOA4Q13772 614 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 BRDTQ58F21 947 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-209ENST00000439886 BSPRYQ5W0U4 402 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms