RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 SLC7A6OSQ96CW6 309 aaPredicted RBP16.53■□□□□ 0.24
DHFR-201ENST00000439211 IFT43Q96FT9 208 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 HAPLN3Q96S86 360 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 MXRA8Q9BRK3 442 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 IMPG2Q9BZV3 1241 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 TRIM17Q9Y577 477 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 PLS3P13797 630 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 DPH6Q7L8W6 267 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 TAS1R2Q8TE23 839 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 VTI1AQ96AJ9 217 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 TMEM98Q9Y2Y6 226 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 PCDHB4Q9Y5E5 795 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 FRMPD4Q14CM0 1322 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 PI4K2BG5E9Z4 385 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 MCF2LO15068 1137 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 CD58P19256 250 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 IRX4P78413 519 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 PPATQ06203 517 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 MTM1Q13496 603 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 SIAH1Q8IUQ4 282 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 SIX5Q8N196 739 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 DHRS1Q96LJ7 313 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 STRCQ7RTU9 1775 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 CYP11B1P15538 503 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 HSPA1LP34931 641 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 CYTH1Q15438 398 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 VSTM1Q6UX27 236 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 PWWP2AQ96N64 755 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 KLHL4Q9C0H6 718 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 SEPT9Q9UHD8 586 aaPredicted RBP16.52■□□□□ 0.24
DHFR-201ENST00000439211 APPL1Q9UKG1 709 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 STARD13Q9Y3M8 1113 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 SRCAPQ6ZRS2 3230 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 NFIBO00712 420 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 ATP2A1O14983 1001 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 ITGA8P53708 1063 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 TTLL12Q14166 644 aaPredicted RBP16.52■□□□□ 0.24
DHFR-201ENST00000439211 ZNF394Q53GI3 561 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 TTC27Q6P3X3 843 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 OR6Y1Q8NGX8 325 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.52■□□□□ 0.24
DHFR-201ENST00000439211 EPS8L1Q8TE68 723 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 MBOAT7Q96N66 472 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 TRABDQ9H4I3 376 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 NAALADL1Q9UQQ1 740 aa16.52■□□□□ 0.24
DHFR-201ENST00000439211 HBS1LQ9Y450 684 aaKnown RBP16.52■□□□□ 0.24
DHFR-201ENST00000439211 RNASEH1O60930 286 aaKnown RBP16.52■□□□□ 0.23
DHFR-201ENST00000439211 PABPC4LP0CB38 370 aaKnown RBP16.52■□□□□ 0.23
DHFR-201ENST00000439211 FOXN2P32314 431 aa16.52■□□□□ 0.23
DHFR-201ENST00000439211 ARPC4P59998 168 aa16.52■□□□□ 0.23
DHFR-201ENST00000439211 JAG1P78504 1218 aa16.52■□□□□ 0.23
DHFR-201ENST00000439211 ITGA9Q13797 1035 aa16.52■□□□□ 0.23
DHFR-201ENST00000439211 TREML1Q86YW5 311 aa16.52■□□□□ 0.23
DHFR-201ENST00000439211 SLC5A5Q92911 643 aa16.52■□□□□ 0.23
DHFR-201ENST00000439211 PCDHB18PQ96TA0 734 aa16.52■□□□□ 0.23
DHFR-201ENST00000439211 RMDN3Q96TC7 470 aa16.52■□□□□ 0.23
DHFR-201ENST00000439211 RAB20Q9NX57 234 aa16.52■□□□□ 0.23
DHFR-201ENST00000439211 IVNS1ABPQ9Y6Y0 642 aa16.52■□□□□ 0.23
DHFR-201ENST00000439211 NCANO14594 1321 aa16.52■□□□□ 0.23
DHFR-201ENST00000439211 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.52■□□□□ 0.23
DHFR-201ENST00000439211 NHSL1Q5SYE7 1610 aa16.52■□□□□ 0.23
DHFR-201ENST00000439211 IGLV3-22A0A075B6J6 115 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 KDM1AO60341 852 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 RPL5P46777 297 aaKnown RBP16.51■□□□□ 0.23
DHFR-201ENST00000439211 NEK2P51955 445 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 ACVR2BQ13705 512 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 ATP1A4Q13733 1029 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 BRDTQ58F21 947 aaPredicted RBP16.51■□□□□ 0.23
DHFR-201ENST00000439211 TMEM39BQ9GZU3 492 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 AGTPBP1Q9UPW5 1226 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 LRRIQ4A6NIV6 560 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 CASQ2O14958 399 aaPredicted RBP16.51■□□□□ 0.23
DHFR-201ENST00000439211 TSPY1Q01534 308 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 CDC16Q13042 620 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 PDK3Q15120 406 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 UBAP2Q5T6F2 1119 aaKnown RBP16.51■□□□□ 0.23
DHFR-201ENST00000439211 ARL8BQ9NVJ2 186 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 KCND2Q9NZV8 630 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 GOLGA8SH3BPF8 625 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 GOLGA8MH3BSY2 632 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 AMPD1P23109 780 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 RARRES1P49788 294 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 DYNLT1P63172 113 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 ALCAMQ13740 583 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 LPIN1Q14693 890 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 DUS1LQ6P1R4 473 aaKnown RBP16.51■□□□□ 0.23
DHFR-201ENST00000439211 TMEM270Q6UE05 265 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 CYFIP1Q7L576 1253 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 FAM160B2Q86V87 743 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 SNF8Q96H20 258 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 SAYSD1Q9NPB0 183 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 TIMMDC1Q9NPL8 285 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 SAR1AQ9NR31 198 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 CHST7Q9NS84 486 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 ARMCX1Q9P291 453 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 RPTORQ8N122 1335 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 ABCA3Q99758 1704 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 ANKRD63C9JTQ0 380 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 GGPS1O95749 300 aa16.51■□□□□ 0.23
DHFR-201ENST00000439211 CYP3A4P08684 503 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms