RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 TSSK4Q6SA08 328 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 SFR1Q86XK3 245 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 TMC8Q8IU68 726 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 SYNPOQ8N3V7 929 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 SPEM1Q8N4L4 309 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 CELF5Q8N6W0 485 aaKnown RBP7.32□□□□□ -1.24
ERCC8-203ENST00000439176 ARMC2Q8NEN0 867 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 BPIFB1Q8TDL5 484 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 NELL1Q92832 810 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 EPSTI1Q96J88 318 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 LRRC3Q9BY71 257 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 DNAJC25Q9H1X3 360 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 EPC1Q9H2F5 836 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 ZSCAN16Q9H4T2 348 aaPredicted RBP7.32□□□□□ -1.24
ERCC8-203ENST00000439176 TMEM206Q9H813 350 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 ABI2Q9NYB9 513 aaPredicted RBP7.32□□□□□ -1.24
ERCC8-203ENST00000439176 UXTQ9UBK9 157 aaPredicted RBP7.32□□□□□ -1.24
ERCC8-203ENST00000439176 SMG5Q9UPR3 1016 aaKnown RBP7.32□□□□□ -1.24
ERCC8-203ENST00000439176 PCDHB5Q9Y5E4 795 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 CLIC4Q9Y696 253 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 F5P12259 2224 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 DMDP11532 3685 aa7.32□□□□□ -1.24
ERCC8-203ENST00000439176 SPTBN4Q9H254 2564 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 SLC38A8A6NNN8 435 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 SPECC1L-ADORA2AF8WAN1 911 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 PPEF2O14830 753 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 FOXD2O60548 495 aaPredicted RBP7.31□□□□□ -1.24
ERCC8-203ENST00000439176 ATG13O75143 517 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 AP1G2O75843 785 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 VNN2O95498 520 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 KRT19P08727 400 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 CSH1P0DML2 217 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 CSH2P0DML3 217 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 CHRNB1P11230 501 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 GARTP22102 1010 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 VARSP26640 1264 aaKnown RBP7.31□□□□□ -1.24
ERCC8-203ENST00000439176 LHX1P48742 406 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 RPL10AP62906 217 aaKnown RBP7.31□□□□□ -1.24
ERCC8-203ENST00000439176 RBP5P82980 135 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 AMPD3Q01432 767 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 CEBPZQ03701 1054 aaKnown RBP7.31□□□□□ -1.24
ERCC8-203ENST00000439176 GRIN1Q05586 938 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 BFSP1Q12934 665 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 MYO1EQ12965 1108 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 FZD5Q13467 585 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 CUL4AQ13619 759 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 PDCD11Q14690 1871 aaKnown RBP7.31□□□□□ -1.24
ERCC8-203ENST00000439176 SURF1Q15526 300 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 ITPRIPL2Q3MIP1 535 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 L1TD1Q5T7N2 865 aaKnown RBP7.31□□□□□ -1.24
ERCC8-203ENST00000439176 WSCD1Q658N2 575 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 LAIR1Q6GTX8 287 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 PRR23BQ6ZRT6 265 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 GAREM2Q75VX8 874 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 CCDC65Q8IXS2 484 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 TMEM86AQ8N2M4 240 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 DCLK2Q8N568 766 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 OR10T2Q8NGX3 314 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 SPATA18Q8TC71 538 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 NOC3LQ8WTT2 800 aaKnown RBP7.31□□□□□ -1.24
ERCC8-203ENST00000439176 TSC1Q92574 1164 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 MRPS31Q92665 395 aaKnown RBP7.31□□□□□ -1.24
ERCC8-203ENST00000439176 RMDN1Q96DB5 314 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 FIZ1Q96SL8 496 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 LPIN3Q9BQK8 851 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 ACBD6Q9BR61 282 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 FAM213AQ9BRX8 229 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 CRISPLD1Q9H336 500 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 OLFML3Q9NRN5 406 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 RBAKQ9NYW8 714 aaPredicted RBP7.31□□□□□ -1.24
ERCC8-203ENST00000439176 TBC1D7Q9P0N9 293 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 ITGA11Q9UKX5 1188 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 CDV3Q9UKY7 258 aaKnown RBP7.31□□□□□ -1.24
ERCC8-203ENST00000439176 USP18Q9UMW8 372 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 AGAP1Q9UPQ3 857 aa7.31□□□□□ -1.24
ERCC8-203ENST00000439176 MYBPHLA2RUH7 354 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 MYMKA6NI61 221 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 TISP43B9A030 160 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 ARNTLO00327 626 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 EXTL3O43909 919 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 LRP3O75074 770 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 PRPF40AO75400 957 aaKnown RBP7.3□□□□□ -1.24
ERCC8-203ENST00000439176 SOAT2O75908 522 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 ITGB3P05106 788 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 TMEM191BP0C7N4 346 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 HAPLN1P10915 354 aaPredicted RBP7.3□□□□□ -1.24
ERCC8-203ENST00000439176 PDIA4P13667 645 aaKnown RBP7.3□□□□□ -1.24
ERCC8-203ENST00000439176 SYT1P21579 422 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 PCSK1P29120 753 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 ADSSP30520 456 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 POLR2BP30876 1174 aaKnown RBP7.3□□□□□ -1.24
ERCC8-203ENST00000439176 PDE6CP51160 858 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 GRSF1Q12849 480 aaKnown RBP eCLIP7.3□□□□□ -1.24
ERCC8-203ENST00000439176 SIM2Q14190 667 aaPredicted RBP7.3□□□□□ -1.24
ERCC8-203ENST00000439176 STK38Q15208 465 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 RSPO4Q2I0M5 234 aaPredicted RBP7.3□□□□□ -1.24
ERCC8-203ENST00000439176 C4orf48Q5BLP8 95 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 STXBP5Q5T5C0 1151 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 LONP2Q86WA8 852 aa7.3□□□□□ -1.24
ERCC8-203ENST00000439176 SPATA2LQ8IUW3 424 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms