RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TBX3O15119 743 aa14.02□□□□□ -0.16
ACTN1-204ENST00000438964 TMEM63AO94886 807 aa14.02□□□□□ -0.16
ACTN1-204ENST00000438964 UNGP13051 313 aaPredicted RBP14.02□□□□□ -0.16
ACTN1-204ENST00000438964 MAGEA10P43363 369 aaPredicted RBP14.02□□□□□ -0.16
ACTN1-204ENST00000438964 CENPCQ03188 943 aa14.02□□□□□ -0.16
ACTN1-204ENST00000438964 MAMLD1Q13495 774 aa14.02□□□□□ -0.16
ACTN1-204ENST00000438964 SYDE1Q6ZW31 735 aaPredicted RBP14.02□□□□□ -0.16
ACTN1-204ENST00000438964 FBXL13Q8NEE6 735 aa14.02□□□□□ -0.16
ACTN1-204ENST00000438964 NAT14Q8WUY8 206 aa14.02□□□□□ -0.16
ACTN1-204ENST00000438964 MCEEQ96PE7 176 aa14.02□□□□□ -0.16
ACTN1-204ENST00000438964 RANBP17Q9H2T7 1088 aaKnown RBP14.02□□□□□ -0.16
ACTN1-204ENST00000438964 VCX3BQ9H321 246 aa14.02□□□□□ -0.16
ACTN1-204ENST00000438964 VCX3AQ9NNX9 186 aa14.02□□□□□ -0.16
ACTN1-204ENST00000438964 CHCHD3Q9NX63 227 aaKnown RBP14.02□□□□□ -0.16
ACTN1-204ENST00000438964 LARSQ9P2J5 1176 aaKnown RBP14.02□□□□□ -0.16
ACTN1-204ENST00000438964 SPATA31A5Q5VU36 1347 aa14.02□□□□□ -0.16
ACTN1-204ENST00000438964 SPATA31A7Q8IWB4 1347 aa14.02□□□□□ -0.16
ACTN1-204ENST00000438964 IPO5O00410 1097 aaKnown RBP14.02□□□□□ -0.17
ACTN1-204ENST00000438964 LYPLA1O75608 230 aaPredicted RBP14.02□□□□□ -0.17
ACTN1-204ENST00000438964 VAV1P15498 845 aa14.02□□□□□ -0.17
ACTN1-204ENST00000438964 SLC1A1P43005 524 aa14.02□□□□□ -0.17
ACTN1-204ENST00000438964 BST1Q10588 318 aa14.02□□□□□ -0.17
ACTN1-204ENST00000438964 TRIP10Q15642 601 aa14.02□□□□□ -0.17
ACTN1-204ENST00000438964 CYP4A22Q5TCH4 519 aa14.02□□□□□ -0.17
ACTN1-204ENST00000438964 DENND5BQ6ZUT9 1274 aa14.02□□□□□ -0.17
ACTN1-204ENST00000438964 CCDC33Q8N5R6 958 aa14.02□□□□□ -0.17
ACTN1-204ENST00000438964 SMC1BQ8NDV3 1235 aa14.02□□□□□ -0.17
ACTN1-204ENST00000438964 CEP70Q8NHQ1 597 aa14.02□□□□□ -0.17
ACTN1-204ENST00000438964 ACCSQ96QU6 501 aa14.02□□□□□ -0.17
ACTN1-204ENST00000438964 APOL6Q9BWW8 343 aa14.02□□□□□ -0.17
ACTN1-204ENST00000438964 IQCGQ9H095 443 aaKnown RBP14.02□□□□□ -0.17
ACTN1-204ENST00000438964 APPL1Q9UKG1 709 aa14.02□□□□□ -0.17
ACTN1-204ENST00000438964 ZNF335Q9H4Z2 1342 aaPredicted RBP14.02□□□□□ -0.17
ACTN1-204ENST00000438964 ALOX15BO15296 676 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 ATP6V1G1O75348 118 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 HLA-DOAP06340 250 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 ABHD2P08910 425 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 AP2B1P63010 937 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 CHI3L2Q15782 390 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.01□□□□□ -0.17
ACTN1-204ENST00000438964 POLNQ7Z5Q5 900 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 ST13P4Q8IZP2 240 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-204ENST00000438964 PPM1NQ8N819 430 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 BBOF1Q8ND07 529 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 OR6Y1Q8NGX8 325 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 DCAKDQ8WVC6 231 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 IKBKGQ9Y6K9 419 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 NHSQ6T4R5 1651 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 ATP2A1O14983 1001 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 POTEJP0CG39 1038 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 NELFEP18615 380 aaKnown RBP14.01□□□□□ -0.17
ACTN1-204ENST00000438964 GALK1P51570 392 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 PRKD1Q15139 912 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-204ENST00000438964 SLC15A2Q16348 729 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 UGCGQ16739 394 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 FBXL19Q6PCT2 694 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 ALLCQ8N6M5 410 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 FAM71DQ8N9W8 422 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-204ENST00000438964 PIP4K2CQ8TBX8 421 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 WDR11Q9BZH6 1224 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 ACSS2Q9NR19 701 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 HOMER2Q9NSB8 354 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 TDRKHQ9Y2W6 561 aaKnown RBP14.01□□□□□ -0.17
ACTN1-204ENST00000438964 LAMB2P55268 1798 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 CAPN8A6NHC0 703 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 GH2P01242 217 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 CD48P09326 243 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 CD1EP15812 388 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 RFX1P22670 979 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 MSLNQ13421 630 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-204ENST00000438964 MMEL1Q495T6 779 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 PABPC1LQ4VXU2 614 aaKnown RBP14.01□□□□□ -0.17
ACTN1-204ENST00000438964 RBM44Q6ZP01 1051 aaKnown RBP14.01□□□□□ -0.17
ACTN1-204ENST00000438964 SEPT12Q8IYM1 358 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 KLHL23Q8NBE8 558 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 CPT1BQ92523 772 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 SLITRK1Q96PX8 696 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 GRIP2Q9C0E4 1043 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 MMADHCQ9H3L0 296 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-204ENST00000438964 TUFT1Q9NNX1 390 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 ATXN10Q9UBB4 475 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 NARFQ9UHQ1 456 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 ZHX2Q9Y6X8 837 aa14.01□□□□□ -0.17
ACTN1-204ENST00000438964 TPP2P29144 1249 aaPredicted RBP14□□□□□ -0.17
ACTN1-204ENST00000438964 ELK3P41970 407 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 ACOT2P49753 483 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 OGDHQ02218 1023 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 MED21Q13503 144 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 EFHC2Q5JST6 749 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 IYDQ6PHW0 289 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 MIER3Q7Z3K6 550 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 AGR3Q8TD06 166 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 PCSK1NQ9UHG2 260 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 PRR12Q9ULL5 1215 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 AGTPBP1Q9UPW5 1226 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 MTO1Q9Y2Z2 717 aaKnown RBP14□□□□□ -0.17
ACTN1-204ENST00000438964 A0A1B0GTW7 788 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 TRIM49D1C9J1S8 452 aa14□□□□□ -0.17
ACTN1-204ENST00000438964 SPECC1L-ADORA2AF8WAN1 911 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms