RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 RSPO2Q6UXX9 243 aaPredicted RBP12.21□□□□□ -0.46
SNHG3-202ENST00000437681 SPATA2LQ8IUW3 424 aaPredicted RBP12.21□□□□□ -0.46
SNHG3-202ENST00000437681 OR6B3Q8NGW1 331 aa12.21□□□□□ -0.46
SNHG3-202ENST00000437681 WHAMMQ8TF30 809 aa12.21□□□□□ -0.46
SNHG3-202ENST00000437681 NXPE3Q969Y0 559 aa12.21□□□□□ -0.46
SNHG3-202ENST00000437681 TTLL2Q9BWV7 592 aa12.21□□□□□ -0.46
SNHG3-202ENST00000437681 SDCBP2Q9H190 292 aa12.21□□□□□ -0.46
SNHG3-202ENST00000437681 NXF1Q9UBU9 619 aaKnown RBP12.21□□□□□ -0.46
SNHG3-202ENST00000437681 POLIQ9UNA4 740 aa12.21□□□□□ -0.46
SNHG3-202ENST00000437681 GREB1Q4ZG55 1949 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 RTN3O95197 1032 aaPredicted RBP12.2□□□□□ -0.46
SNHG3-202ENST00000437681 CSH1P0DML2 217 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 CSH2P0DML3 217 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 ALDH1A3P47895 512 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 CBX1P83916 185 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 VEPH1Q14D04 833 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 SLC34A2O95436 690 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 LRG1P02750 347 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 IGFBP6P24592 240 aaPredicted RBP12.2□□□□□ -0.46
SNHG3-202ENST00000437681 NDST1P52848 882 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 MRPS5P82675 430 aaKnown RBP12.2□□□□□ -0.46
SNHG3-202ENST00000437681 KCNMA1Q12791 1236 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 SMAD2Q15796 467 aaKnown RBP12.2□□□□□ -0.46
SNHG3-202ENST00000437681 SYCE2Q6PIF2 218 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 EP400NLQ6ZTU2 488 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 STK32AQ8WU08 396 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 RABGGTAQ92696 567 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 GANQ9H2C0 597 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 CRTAC1Q9NQ79 661 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 NR2E1Q9Y466 385 aa12.2□□□□□ -0.46
SNHG3-202ENST00000437681 NUP210Q8TEM1 1887 aaPredicted RBP12.19□□□□□ -0.46
SNHG3-202ENST00000437681 TBX10O75333 385 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 VNN2O95498 520 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 C8AP07357 584 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 PTPN2P17706 415 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 RPL34P49207 117 aaKnown RBP12.19□□□□□ -0.46
SNHG3-202ENST00000437681 RAD23BP54727 409 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 CNGA2Q16280 664 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 ATAT1Q5SQI0 421 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 RNF19BQ6ZMZ0 732 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 PDZD8Q8NEN9 1154 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 AUTS2Q8WXX7 1259 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 SYN2Q92777 582 aaPredicted RBP12.19□□□□□ -0.46
SNHG3-202ENST00000437681 TATDN2Q93075 761 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 PSMG2Q969U7 264 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 E2F7Q96AV8 911 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 WDR6Q9NNW5 1121 aaKnown RBP12.19□□□□□ -0.46
SNHG3-202ENST00000437681 CLDND1Q9NY35 253 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 TAB2Q9NYJ8 693 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 PCDHGC3Q9UN70 934 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 YIPF1Q9Y548 306 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 FAM92AA1XBS5 289 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 C2CD2LO14523 706 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 MBTPS2O43462 519 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 TCF3P15923 654 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 EPCAMP16422 314 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 ANXA13P27216 316 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 PBX1P40424 430 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 SLC8A3P57103 927 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 SNX16P57768 344 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 ARID5BQ14865 1188 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 SLC39A12Q504Y0 691 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 SNX30Q5VWJ9 437 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 PHLDB3Q6NSJ2 640 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 LCLAT1Q6UWP7 414 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 FAM71AQ8IYT1 594 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 ZDHHC14Q8IZN3 488 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 SLC4A11Q8NBS3 891 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 MYLPFQ96A32 169 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 ZNF707Q96C28 371 aaPredicted RBP12.19□□□□□ -0.46
SNHG3-202ENST00000437681 FAM161BQ96MY7 647 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 DENND4CQ5VZ89 1909 aa12.19□□□□□ -0.46
SNHG3-202ENST00000437681 TRIOBPQ9H2D6 2365 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 GRXCR2A6NFK2 248 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 PRRG1O14668 218 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 ADAM12O43184 909 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 JAM2P57087 298 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 FANCCQ00597 558 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 ADCY1Q08828 1119 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 CBX2Q14781 532 aaPredicted RBP12.18□□□□□ -0.46
SNHG3-202ENST00000437681 PABPC1LQ4VXU2 614 aaKnown RBP12.18□□□□□ -0.46
SNHG3-202ENST00000437681 HS1BP3Q53T59 392 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 SGO2Q562F6 1265 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 NEK11Q8NG66 645 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 KCTD13Q8WZ19 329 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 LHX5Q9H2C1 402 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 DMAP1Q9NPF5 467 aaPredicted RBP12.18□□□□□ -0.46
SNHG3-202ENST00000437681 CDC25CP30307 473 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 TUBP50607 506 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 UBXN1Q04323 297 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 IQCEQ6IPM2 695 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 LRRTM3Q86VH5 581 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 DRC7Q8IY82 874 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 PPM1KQ8N3J5 372 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 ANKRD52Q8NB46 1076 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 B3GALT6Q96L58 329 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 ZNF512Q96ME7 567 aaPredicted RBP12.18□□□□□ -0.46
SNHG3-202ENST00000437681 PI4K2AQ9BTU6 479 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 DUSP16Q9BY84 665 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 B3GNT5Q9BYG0 378 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms