RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 TAF5Q15542 800 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 GALNTL6Q49A17 601 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 MSS51Q4VC12 460 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 RNASEH2BQ5TBB1 312 aaKnown RBP10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 EEF1DP3Q658K8 133 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 ZPBP2Q6X784 338 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 TRABD2AQ86V40 505 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 ERICH1Q86X53 443 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 TMEM35BQ8NCS4 154 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 SLCO1B3Q9NPD5 702 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 PRKAG3Q9UGI9 489 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 A0A1W2PPM1 405 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 SGK1O00141 431 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 PRKCBP05771 671 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 CALB1P05937 261 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 RFC5P40937 340 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 VCPP55072 806 aaKnown RBP10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 MXRA7P84157 204 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 EFTUD2Q15029 972 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 CCDC142Q17RM4 750 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 TFDP3Q5H9I0 405 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 LBX2Q6XYB7 198 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 BBOF1Q8ND07 529 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 MRPL4Q9BYD3 311 aaKnown RBP10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 MINDY3Q9H8M7 445 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 BATF3Q9NR55 127 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 NRBP2Q9NSY0 501 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 HMGXB4Q9UGU5 601 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 PGK2P07205 417 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 GSTA1P08263 222 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 DNAJC3Q13217 504 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 PDCD2Q16342 344 aaPredicted RBP10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 DUOXA2Q1HG44 320 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 BZW1Q7L1Q6 419 aaKnown RBP10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 NCAPG2Q86XI2 1143 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 RHPN2Q8IUC4 686 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 WDR83Q9BRX9 315 aaKnown RBP10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 ECT2Q9H8V3 914 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 VPS37BQ9H9H4 285 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 STK38LQ9Y2H1 464 aa10.95□□□□□ -0.66
CLSTN1-203ENST00000435891 POLR2AP24928 1970 aaKnown RBP10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 A8MUI8 341 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 OGTO15294 1046 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 LRCH4O75427 683 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 SUN1O94901 812 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 ATP6V1G2O95670 118 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 IQCF3P0C7M6 154 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 FGFR1P11362 822 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 CD19P15391 556 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 GPX6P59796 221 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 PDIA2Q13087 525 aaKnown RBP10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 ZNF699Q32M78 642 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 DRICH1Q6PGQ1 229 aaPredicted RBP10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 B4GALNT2Q8NHY0 566 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 ACTL9Q8TC94 416 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 KCNV2Q8TDN2 545 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 MAGEB18Q96M61 343 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 FAM210AQ96ND0 272 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 TWNKQ96RR1 684 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 NKIRAS1Q9NYS0 192 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 TCRBV7S3A2A0A539 114 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 FAM47DPA6NHR8 397 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 ASMTLO95671 621 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 ABHD2P08910 425 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 GNAT1P11488 350 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 EDNRBP24530 442 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 POLE2P56282 527 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 OTUD4Q01804 1114 aaKnown RBP10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 SLC25A11Q02978 314 aaKnown RBP10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 TRPC3Q13507 836 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 VGLL4Q14135 290 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 SGSM1Q2NKQ1 1148 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 RAB6CQ53S08 254 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 ARHGEF18Q6ZSZ5 1173 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 ECHDC2Q86YB7 292 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 CHST13Q8NET6 341 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.94□□□□□ -0.661e-10■■□□□ 12.4
CLSTN1-203ENST00000435891 SLC35B2Q8TB61 432 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 SEPT1Q8WYJ6 367 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 PRCCQ92733 491 aaPredicted RBP10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 NLRP4Q96MN2 994 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 CPXM1Q96SM3 734 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 RAB6CQ9H0N0 254 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 SDCBP2Q9H190 292 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 CLUHO75153 1309 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 CXCL8P10145 99 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 PSMA2P25787 234 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 SSTR1P30872 391 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 RPA3P35244 121 aaPredicted RBP10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 MCL1Q07820 350 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 BNIP1Q12981 228 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 FNBP1LQ5T0N5 605 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 LRRC38Q5VT99 294 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 DENND1AQ8TEH3 1009 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 COPS5Q92905 334 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 CFAP57Q96MR6 1250 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 CCDC77Q9BR77 488 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 C12orf65Q9H3J6 166 aaKnown RBP10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 PCSK1NQ9UHG2 260 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 ARL2BPQ9Y2Y0 163 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms