RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 TXNP10599 105 aaKnown RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 CETPP11597 493 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 PTPN11Q06124 597 aaPredicted RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 MYO1EQ12965 1108 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 PPIL2Q13356 520 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 SCARA3Q6AZY7 606 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 CYB5D1Q6P9G0 228 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 FASTKD5Q7L8L6 764 aaKnown RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 TRABD2AQ86V40 505 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 TRIM50Q86XT4 487 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 NT5DC4Q86YG4 428 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 PARP9Q8IXQ6 854 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 FUKQ8N0W3 1084 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 CYP4X1Q8N118 509 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 CCDC63Q8NA47 563 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 MAGEC3Q8TD91 643 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 GTF3C2Q8WUA4 911 aaPredicted RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 RSAD2Q8WXG1 361 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 PRCCQ92733 491 aaPredicted RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 MCRS1Q96EZ8 462 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 TMEM176AQ96HP8 235 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 FGD4Q96M96 766 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 TGS1Q96RS0 853 aaKnown RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 SMC6Q96SB8 1091 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 VPS37BQ9H9H4 285 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 SSU72Q9NP77 194 aaKnown RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 FGFR1OP2Q9NVK5 253 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 TBK1Q9UHD2 729 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 COL1A2P08123 1366 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 LACTBL1A8MY62 500 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 B4GALT5O43286 388 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 CST8O60676 142 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 PEX10O60683 326 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 CILPO75339 1184 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 LRCH4O75427 683 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 C22orf31O95567 290 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 PGK2P07205 417 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 CXCL8P10145 99 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 CREB1P16220 341 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 PCK1P35558 622 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 GTF2A1P52655 376 aaPredicted RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 OSTNP61366 133 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 OTUD4Q01804 1114 aaKnown RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 PDIA2Q13087 525 aaKnown RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 LAMC2Q13753 1193 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 SPARCL1Q14515 664 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 STILQ15468 1287 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 SNCBQ16143 134 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 HIF1AQ16665 826 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 KLHL38Q2WGJ6 581 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 WDR72Q3MJ13 1102 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 ZC3H12AQ5D1E8 599 aaKnown RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 RNF43Q68DV7 783 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 TXNRD3NBQ6F5E7 133 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 PRUNE1Q86TP1 453 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 RFX6Q8HWS3 928 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 C1orf127Q8N9H9 656 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 ATP11CQ8NB49 1132 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 SLC4A11Q8NBS3 891 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 KCTD6Q8NC69 237 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 CMASQ8NFW8 434 aaPredicted RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 JOSD2Q8TAC2 188 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 CNKSR2Q8WXI2 1034 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 OTUD5Q96G74 571 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 NCAPGQ9BPX3 1015 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 SGIP1Q9BQI5 828 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 TRABDQ9H4I3 376 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 ZWILCHQ9H900 591 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 RSAD1Q9HA92 442 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 METTL5Q9NRN9 209 aaKnown RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.95□□□□□ -0.66
CD44-210ENST00000434472 KLHL14Q9P2G3 628 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 PSMC3IPQ9P2W1 217 aaPredicted RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 RBPJLQ9UBG7 517 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 SIX4Q9UIU6 781 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 FARP1Q9Y4F1 1045 aaPredicted RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.95□□□□□ -0.66
CD44-210ENST00000434472 PAPPA2Q9BXP8 1791 aa10.95□□□□□ -0.66
CD44-210ENST00000434472 POC1B-GALNT4F8VUJ3 575 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 APOC4-APOC2K7ER74 178 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 GPR25O00155 361 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 MCF2LO15068 1137 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 MICAL2O94851 1124 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 TRUB2O95900 331 aaKnown RBP10.94□□□□□ -0.66
CD44-210ENST00000434472 IFNB1P01574 187 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 APOC2P02655 101 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 ETS1P14921 441 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 ATP2A2P16615 1042 aaKnown RBP10.94□□□□□ -0.66
CD44-210ENST00000434472 DESP17661 470 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 KRT15P19012 456 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 GBP2P32456 591 aaPredicted RBP10.94□□□□□ -0.66
CD44-210ENST00000434472 RAP1GAPP47736 663 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 CLCN3P51790 818 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 CCDC15Q0P6D6 951 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 ACVR2BQ13705 512 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 MPP2Q14168 576 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 TFDP2Q14188 446 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 MTFR1Q15390 333 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 SPRED3Q2MJR0 410 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 FAM47CQ5HY64 1035 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms