RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ATXN7L3BQ96GX2 97 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 NLRP4Q96MN2 994 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 MIPEPQ99797 713 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 TMEM120AQ9BXJ8 343 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 TRIM55Q9BYV6 548 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 CYP26B1Q9NR63 512 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 ZFATQ9P243 1243 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 SYNJ2BP-COX16A0A087WUM0 186 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 B2RBV5 119 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 UGT1A9O60656 530 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 MTA2O94776 668 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 USP1O94782 785 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 GEMIN4P57678 1058 aaKnown RBP13.09□□□□□ -0.31
CDH3-202ENST00000429102 ACTR2P61160 394 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 CENPCQ03188 943 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 PTK7Q13308 1070 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 PPP2R5DQ14738 602 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 MROH9Q5TGP6 573 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 CCDC62Q6P9F0 684 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 CLNKQ7Z7G1 428 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 PPP1R13LQ8WUF5 828 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 FAM151AQ8WW52 585 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 THTPAQ9BU02 230 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 UGT1A7Q9HAW7 530 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 UGT1A10Q9HAW8 530 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 UGT1A8Q9HAW9 530 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 PXMP2Q9NR77 195 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 CYP39A1Q9NYL5 469 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 COX16Q9P0S2 106 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 IP6K2Q9UHH9 426 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 UBIAD1Q9Y5Z9 338 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 KRT3P12035 628 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 IL1R2P27930 398 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 RPL22P35268 128 aaKnown RBP13.09□□□□□ -0.31
CDH3-202ENST00000429102 EPHB1P54762 984 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 EIF3EP60228 445 aaKnown RBP13.09□□□□□ -0.31
CDH3-202ENST00000429102 PDK4Q16654 411 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 TSNAXIP1Q2TAA8 658 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 SNX30Q5VWJ9 437 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 ANO7Q6IWH7 933 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 PDIK1LQ8N165 341 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 POU5F2Q8N7G0 328 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 EXD1Q8NHP7 514 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 SPATA18Q8TC71 538 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.09□□□□□ -0.31
CDH3-202ENST00000429102 ATP6V0A1Q93050 837 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 MFSD14AQ96MC6 490 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 SYT15Q9BQS2 421 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 CADM1Q9BY67 442 aaKnown RBP13.09□□□□□ -0.31
CDH3-202ENST00000429102 IL1RAPL1Q9NZN1 696 aa13.09□□□□□ -0.31
CDH3-202ENST00000429102 TMEM63AO94886 807 aa13.08□□□□□ -0.31
CDH3-202ENST00000429102 EDN1P05305 212 aa13.08□□□□□ -0.31
CDH3-202ENST00000429102 ARL4CP56559 192 aa13.08□□□□□ -0.31
CDH3-202ENST00000429102 GCNT1Q02742 428 aa13.08□□□□□ -0.31
CDH3-202ENST00000429102 EMC2Q15006 297 aa13.08□□□□□ -0.31
CDH3-202ENST00000429102 ZACNQ401N2 412 aa13.08□□□□□ -0.31
CDH3-202ENST00000429102 B3GNT9Q6UX72 402 aa13.08□□□□□ -0.31
CDH3-202ENST00000429102 DLK2Q6UY11 383 aa13.08□□□□□ -0.31
CDH3-202ENST00000429102 SAMD7Q7Z3H4 446 aa13.08□□□□□ -0.31
CDH3-202ENST00000429102 FAF2Q96CS3 445 aa13.08□□□□□ -0.31
CDH3-202ENST00000429102 JPH1Q9HDC5 661 aaPredicted RBP13.08□□□□□ -0.31
CDH3-202ENST00000429102 RAB6BQ9NRW1 208 aa13.08□□□□□ -0.31
CDH3-202ENST00000429102 CISHQ9NSE2 258 aa13.08□□□□□ -0.31
CDH3-202ENST00000429102 CPSF2Q9P2I0 782 aaKnown RBP13.08□□□□□ -0.31
CDH3-202ENST00000429102 STRCQ7RTU9 1775 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 CLUHO75153 1309 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 KBTBD13C9JR72 458 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 INO80B-WBP1J3KQ70 363 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 TOM1L1O75674 476 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 APRTP07741 180 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 ZNF252P-AS1Q0IIN9 211 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 MKRN3Q13064 507 aaKnown RBP13.08□□□□□ -0.32
CDH3-202ENST00000429102 DENND1BQ6P3S1 775 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 RINLQ6ZS11 566 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 RCOR2Q8IZ40 523 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 SHKBP1Q8TBC3 707 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 TRAPPC12Q8WVT3 735 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 C10orf82Q8WW14 230 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 RBM41Q96IZ5 413 aaKnown RBP13.08□□□□□ -0.32
CDH3-202ENST00000429102 SERAC1Q96JX3 654 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 MMP19Q99542 508 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 CEP41Q9BYV8 373 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 INO80BQ9C086 356 aaPredicted RBP13.08□□□□□ -0.32
CDH3-202ENST00000429102 SLC17A6Q9P2U8 582 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 LOC100653049A0A140TA62 436 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 TXNDC9O14530 226 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 EXTL3O43909 919 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 KRT34O76011 436 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 VCPP55072 806 aaKnown RBP13.08□□□□□ -0.32
CDH3-202ENST00000429102 CRADDP78560 199 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 KRT76Q01546 638 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 PEX6Q13608 980 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 TFDP3Q5H9I0 405 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 ARMC3Q5W041 872 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 KRT27Q7Z3Y8 459 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 PRPF39Q86UA1 669 aaKnown RBP13.08□□□□□ -0.32
CDH3-202ENST00000429102 HACE1Q8IYU2 909 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 ALLCQ8N6M5 410 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 SCG3Q8WXD2 468 aaKnown RBP13.08□□□□□ -0.32
CDH3-202ENST00000429102 SLC7A3Q8WY07 619 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms