RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ADAM23O75077 832 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 SERPINA6P08185 405 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 RSPH10BP0C881 870 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 BGNP21810 368 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 PHBP35232 272 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 HSPA13P48723 471 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 C16orf72Q14CZ0 275 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 MORF4L2Q15014 288 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 KLHL38Q2WGJ6 581 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 MEX3CQ5U5Q3 659 aaKnown RBP16.82■□□□□ 0.28
C9orf3-206ENST00000428313 NEPROQ6NW34 567 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 PTF1AQ7RTS3 328 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 PRPF18Q99633 342 aaKnown RBP16.82■□□□□ 0.28
C9orf3-206ENST00000428313 NRDE2Q9H7Z3 1164 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 CHORDC1Q9UHD1 332 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-206ENST00000428313 NUP98P52948 1817 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 ARFGEF1Q9Y6D6 1849 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 ERVV-1B6SEH8 477 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 UBAP1LF5GYI3 381 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 H3BNX3 289 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 LSM1O15116 133 aaKnown RBP16.82■□□□□ 0.28
C9orf3-206ENST00000428313 ADCY6O43306 1168 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 LPXNO60711 386 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 CRTAMO95727 393 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 SRGAP2CP0DJJ0 459 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 SRGAP2BP0DMP2 458 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 IL2RBP14784 551 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 ZNF23P17027 643 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 ENTPD1P49961 510 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 PTP4A2Q12974 167 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 FASTKD3Q14CZ7 662 aaKnown RBP16.82■□□□□ 0.28
C9orf3-206ENST00000428313 LLGL1Q15334 1064 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 CNGA3Q16281 694 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 INAQ16352 499 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 HSF5Q4G112 596 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-206ENST00000428313 CLEC4GQ6UXB4 293 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 TTC13Q8NBP0 860 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 SGF29Q96ES7 293 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 APOPT1Q96IL0 206 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 PIGSQ96S52 555 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 REEP2Q9BRK0 252 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 ANO3Q9BYT9 981 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 MKNK2Q9HBH9 465 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 TMOD2Q9NZR1 351 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 SCHIP1Q9P0W5 487 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-206ENST00000428313 RABGEF1Q9UJ41 708 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 SQORQ9Y6N5 450 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 KDM4FA0A1W2PPD8 638 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 GOLGA8TH3BQL2 631 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 TGFB1I1O43294 461 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 TSPY3P0CV98 308 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 TSPY8P0CW00 308 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 SERPINB6P35237 376 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 NEK2P51955 445 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 MDH1BQ5I0G3 518 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 ZNF746Q6NUN9 644 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-206ENST00000428313 ELMSAN1Q6PJG2 1045 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 NSUN4Q96CB9 384 aaKnown RBP16.81■□□□□ 0.28
C9orf3-206ENST00000428313 ALG13Q9NP73 1137 aaKnown RBP16.81■□□□□ 0.28
C9orf3-206ENST00000428313 NUB1Q9Y5A7 615 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 GPC6Q9Y625 555 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-206ENST00000428313 AP4B1Q9Y6B7 739 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 USP17L3A6NCW0 530 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 USP17L4A6NCW7 530 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 SOBPA7XYQ1 873 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 I3L4J1 428 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 EIF3DO15371 548 aaKnown RBP eCLIP16.81■□□□□ 0.28
C9orf3-206ENST00000428313 BAIAP3O94812 1187 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 ALDH3B2P48448 385 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 USP17L1Q7RTZ2 530 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 KBTBD6Q86V97 674 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 LMO3Q8TAP4 145 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 BORCS5Q969J3 196 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 PAFAH2Q99487 392 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 CPVLQ9H3G5 476 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 TSC22D4Q9Y3Q8 395 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 TRIM17Q9Y577 477 aa16.81■□□□□ 0.28
C9orf3-206ENST00000428313 PRR5-ARHGAP8B1AHC4 643 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 POLR2MP0CAP2 368 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 RBP3P10745 1247 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 RFC4P35249 363 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 STT3AP46977 705 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 ARHGAP8P85298 464 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 RABGAP1LQ5R372 815 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 C12orf60Q5U649 245 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 ACTRT2Q8TDY3 377 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 MRRFQ96E11 262 aaKnown RBP16.8■□□□□ 0.28
C9orf3-206ENST00000428313 NEURL2Q9BR09 285 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 TRPC7Q9HCX4 862 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 TMOD3Q9NYL9 352 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 IGSF9Q9P2J2 1179 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 NOCTQ9UK39 431 aaKnown RBP16.8■□□□□ 0.28
C9orf3-206ENST00000428313 APPL1Q9UKG1 709 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 PSMD13Q9UNM6 376 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 EXOC7Q9UPT5 735 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 SHOC2Q9UQ13 582 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 E5RJQ4 531 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 GCNT3O95395 438 aa16.8■□□□□ 0.28
C9orf3-206ENST00000428313 TNNI2P48788 182 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms