RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 EXOC7Q9UPT5 735 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 MTO1Q9Y2Z2 717 aaKnown RBP7.85□□□□□ -1.15
LINC01108-201ENST00000427276 MAD1L1Q9Y6D9 718 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 ATP8B3O60423 1300 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 SPATA31A1Q5TZJ5 1347 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 TCRBV7S3A2A0A539 114 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 TRPA1O75762 1119 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 TCEA3O75764 348 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 RARRES1P49788 294 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 HIRAP54198 1017 aaPredicted RBP7.85□□□□□ -1.15
LINC01108-201ENST00000427276 GPX6P59796 221 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 PSMC5P62195 406 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 DYNC1I2Q13409 638 aaKnown RBP7.85□□□□□ -1.15
LINC01108-201ENST00000427276 TMED1Q13445 227 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 MYBPC2Q14324 1141 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 TRIP10Q15642 601 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 CHI3L2Q15782 390 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 ZNF568Q3ZCX4 644 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 RABGAP1LQ5R372 815 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 USP37Q86T82 979 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 CCDC33Q8N5R6 958 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 SHKBP1Q8TBC3 707 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 ACTL9Q8TC94 416 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 AGR3Q8TD06 166 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 HSPH1Q92598 858 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 RBM41Q96IZ5 413 aaKnown RBP7.85□□□□□ -1.15
LINC01108-201ENST00000427276 HIC2Q96JB3 615 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 TCHPQ9BT92 498 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 ASCC2Q9H1I8 757 aaPredicted RBP7.85□□□□□ -1.15
LINC01108-201ENST00000427276 EBF3Q9H4W6 596 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 KCNH7Q9NS40 1196 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 STX18Q9P2W9 335 aaKnown RBP7.85□□□□□ -1.15
LINC01108-201ENST00000427276 ASB3Q9Y575 518 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 CTDP1Q9Y5B0 961 aaPredicted RBP7.85□□□□□ -1.15
LINC01108-201ENST00000427276 PCDHB2Q9Y5E7 798 aa7.85□□□□□ -1.15
LINC01108-201ENST00000427276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.84□□□□□ -1.15
LINC01108-201ENST00000427276 CLRN2A0PK11 232 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 TRIM49D1C9J1S8 452 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 PIK3R2O00459 728 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 TYROBPO43914 113 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 MTA2O94776 668 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 OR6B1O95007 311 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 P4HBP07237 508 aaKnown RBP7.84□□□□□ -1.15
LINC01108-201ENST00000427276 NCF2P19878 526 aaPredicted RBP7.84□□□□□ -1.15
LINC01108-201ENST00000427276 CIITAP33076 1130 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 ELK3P41970 407 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 QARSP47897 775 aaKnown RBP7.84□□□□□ -1.15
LINC01108-201ENST00000427276 LIG4P49917 911 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 GDF10P55107 478 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 OTUD4Q01804 1114 aaKnown RBP7.84□□□□□ -1.15
LINC01108-201ENST00000427276 MAMLD1Q13495 774 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 MED21Q13503 144 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 PEX6Q13608 980 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 SLC15A2Q16348 729 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 KBTBD12Q3ZCT8 623 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 MMEL1Q495T6 779 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 BSPRYQ5W0U4 402 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 TMEM179Q6ZVK1 233 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 SPATA24Q86W54 205 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 NUDCD3Q8IVD9 361 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 CEP70Q8NHQ1 597 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 FAM136AQ96C01 138 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 FAM163AQ96GL9 167 aaPredicted RBP7.84□□□□□ -1.15
LINC01108-201ENST00000427276 CEP170P1Q96L14 293 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 FAM81BQ96LP2 452 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 CSRNP1Q96S65 589 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 TUBB6Q9BUF5 446 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 NAV1Q8NEY1 1877 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 IQANK1A0A1B0GTG1 560 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 PRR5-ARHGAP8B1AHC4 643 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 E5RJQ4 531 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 P4HA2O15460 535 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 MAGEB2O15479 319 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 HNRNPRO43390 633 aaKnown RBP7.84□□□□□ -1.15
LINC01108-201ENST00000427276 ZMPSTE24O75844 475 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 HLA-DRAP01903 254 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 MUTP22033 750 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 KLRC2P26717 231 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 ADSSP30520 456 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 ARHGAP8P85298 464 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 OCRLQ01968 901 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 TCHHL1Q5QJ38 904 aaPredicted RBP7.84□□□□□ -1.15
LINC01108-201ENST00000427276 TREML1Q86YW5 311 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 SLC9A9Q8IVB4 645 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 FEZF2Q8TBJ5 459 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 DDX1Q92499 740 aaKnown RBP7.84□□□□□ -1.15
LINC01108-201ENST00000427276 SLCO2A1Q92959 643 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 OPTNQ96CV9 577 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 SERAC1Q96JX3 654 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 PPP1R36Q96LQ0 422 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 AGBL1Q96MI9 1066 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 ECSITQ9BQ95 431 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 SENP7Q9BQF6 1050 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 ETNK2Q9NVF9 386 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 NYAP2Q9P242 653 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 RABGEF1Q9UJ41 708 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 TBX20Q9UMR3 447 aa7.84□□□□□ -1.15
LINC01108-201ENST00000427276 DDX60LQ5H9U9 1706 aaKnown RBP7.84□□□□□ -1.16
LINC01108-201ENST00000427276 H7C0C1 242 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 ALOX15BO15296 676 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms