RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 TRAF7Q6Q0C0 670 aa14.38□□□□□ -0.11
SREBF2-202ENST00000424354 P3H2Q8IVL5 708 aa14.38□□□□□ -0.11
SREBF2-202ENST00000424354 EFHBQ8N7U6 833 aa14.38□□□□□ -0.11
SREBF2-202ENST00000424354 SNRNP27Q8WVK2 155 aaKnown RBP14.38□□□□□ -0.11
SREBF2-202ENST00000424354 CELF1Q92879 486 aaKnown RBP14.38□□□□□ -0.11
SREBF2-202ENST00000424354 ILKAPQ9H0C8 392 aaPredicted RBP14.38□□□□□ -0.11
SREBF2-202ENST00000424354 JPH1Q9HDC5 661 aaPredicted RBP14.38□□□□□ -0.11
SREBF2-202ENST00000424354 MTMR4Q9NYA4 1195 aa14.38□□□□□ -0.11
SREBF2-202ENST00000424354 APPL1Q9UKG1 709 aa14.38□□□□□ -0.11
SREBF2-202ENST00000424354 POLRMTO00411 1230 aaKnown RBP14.37□□□□□ -0.11
SREBF2-202ENST00000424354 SNUPNO95149 360 aaKnown RBP14.37□□□□□ -0.11
SREBF2-202ENST00000424354 FAM111AQ96PZ2 611 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 KLHL4Q9C0H6 718 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 RAB21Q9UL25 225 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 PKD1L3Q7Z443 1732 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 A0A0A6YYK5 440 aaPredicted RBP14.37□□□□□ -0.11
SREBF2-202ENST00000424354 ACBD5Q5T8D3 534 aaPredicted RBP14.37□□□□□ -0.11
SREBF2-202ENST00000424354 ACAD10Q6JQN1 1059 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 ATPAF2Q8N5M1 289 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 B4GALNT2Q8NHY0 566 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 GIMAP4Q9NUV9 329 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 SYBUQ9NX95 663 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 DCDC2Q9UHG0 476 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 C5orf58C9J3I9 102 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 ATXN3P54252 364 aaPredicted RBP14.37□□□□□ -0.11
SREBF2-202ENST00000424354 KCNMA1Q12791 1236 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 PTPAQ15257 358 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 LDHDQ86WU2 507 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 ZNF786Q8N393 782 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 AFG1LQ8WV93 481 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 PAPOLBQ9NRJ5 636 aaKnown RBP14.37□□□□□ -0.11
SREBF2-202ENST00000424354 AFF4Q9UHB7 1163 aaKnown RBP14.37□□□□□ -0.11
SREBF2-202ENST00000424354 TAGLN3Q9UI15 199 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 TAF6LQ9Y6J9 622 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 RPA1P27694 616 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 COBLL1Q53SF7 1204 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 MFN1Q8IWA4 741 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 DAGLBQ8NCG7 672 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.37□□□□□ -0.11
SREBF2-202ENST00000424354 TFR2Q9UP52 801 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 HPSEQ9Y251 543 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 FAM95CA0A1B0GW59 222 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 KCNV1Q6PIU1 500 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 CCNJLQ8IV13 435 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 TDRD3Q9H7E2 651 aaKnown RBP14.37□□□□□ -0.11
SREBF2-202ENST00000424354 CAPN6Q9Y6Q1 641 aa14.37□□□□□ -0.11
SREBF2-202ENST00000424354 EEF2KO00418 725 aaKnown RBP14.36□□□□□ -0.11
SREBF2-202ENST00000424354 DGKIO75912 1065 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 PLEKP08567 350 aaPredicted RBP14.36□□□□□ -0.11
SREBF2-202ENST00000424354 GPD1P21695 349 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 THAP2Q9H0W7 228 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 EFCAB1Q9HAE3 211 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 TMEM161AQ9NX61 479 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 KANSL1LA0AUZ9 987 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 ATMINO43313 823 aaPredicted RBP14.36□□□□□ -0.11
SREBF2-202ENST00000424354 HIST1H2AGP0C0S8 130 aaPredicted RBP14.36□□□□□ -0.11
SREBF2-202ENST00000424354 HIST1H2ADP20671 130 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 HERVK_113P62684 666 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 RAD51Q06609 339 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 OVGP1Q12889 678 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 PTK6Q13882 451 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 TRMT5Q32P41 509 aaKnown RBP14.36□□□□□ -0.11
SREBF2-202ENST00000424354 NRAPQ86VF7 1730 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 SHCBP1Q8NEM2 672 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 RFWD2Q8NHY2 731 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 WNK4Q96J92 1243 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 HIST1H2AHQ96KK5 128 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 HIST1H2AJQ99878 128 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 C17orf80Q9BSJ5 609 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 H2AFJQ9BTM1 129 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 SPON2Q9BUD6 331 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 RASSF9O75901 435 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 FKBP9O95302 570 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 HLA-DRAP01903 254 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 FDFT1P37268 417 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 VCPP55072 806 aaKnown RBP14.36□□□□□ -0.11
SREBF2-202ENST00000424354 SPDYAQ5MJ70 313 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 MROH9Q5TGP6 573 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 FKBP9P1Q75LS8 142 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 LRRC6Q86X45 466 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 BBS7Q8IWZ6 715 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 TUBGCP3Q96CW5 907 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 CNOT7Q9UIV1 285 aaKnown RBP14.36□□□□□ -0.11
SREBF2-202ENST00000424354 HPS5Q9UPZ3 1129 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 CAB39Q9Y376 341 aaPredicted RBP14.36□□□□□ -0.11
SREBF2-202ENST00000424354 A0A087X0T9 212 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 CLPTM1O96005 669 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 FAM228BP0C875 321 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 ACADSBP45954 432 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 APBB2Q92870 758 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 VPS50Q96JG6 964 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 SLC24A2Q9UI40 661 aa14.36□□□□□ -0.11
SREBF2-202ENST00000424354 NFIBO00712 420 aa14.35□□□□□ -0.11
SREBF2-202ENST00000424354 TM9SF1O15321 606 aa14.35□□□□□ -0.11
SREBF2-202ENST00000424354 CLASP2O75122 1294 aaKnown RBP14.35□□□□□ -0.11
SREBF2-202ENST00000424354 UBOX5O94941 541 aa14.35□□□□□ -0.11
SREBF2-202ENST00000424354 NNMTP40261 264 aa14.35□□□□□ -0.11
SREBF2-202ENST00000424354 CENPPQ6IPU0 288 aa14.35□□□□□ -0.11
SREBF2-202ENST00000424354 BNC2Q6ZN30 1099 aaPredicted RBP14.35□□□□□ -0.11
SREBF2-202ENST00000424354 RNF149Q8NC42 400 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms