RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 GJA9P57773 515 aa17.46■□□□□ 0.38
CMTM3-202ENST00000424011 GNGT1P63211 74 aa17.46■□□□□ 0.38
CMTM3-202ENST00000424011 STILQ15468 1287 aa17.46■□□□□ 0.38
CMTM3-202ENST00000424011 ZBTB6Q15916 424 aa17.46■□□□□ 0.38
CMTM3-202ENST00000424011 SGO2Q562F6 1265 aa17.46■□□□□ 0.38
CMTM3-202ENST00000424011 HEXIM2Q96MH2 286 aaKnown RBP17.46■□□□□ 0.38
CMTM3-202ENST00000424011 FMO2Q99518 471 aa17.46■□□□□ 0.38
CMTM3-202ENST00000424011 ELOVL4Q9GZR5 314 aa17.46■□□□□ 0.38
CMTM3-202ENST00000424011 HOMER3Q9NSC5 361 aa17.46■□□□□ 0.38
CMTM3-202ENST00000424011 CENPFP49454 3210 aa17.45■□□□□ 0.38
CMTM3-202ENST00000424011 LRRC38Q5VT99 294 aa17.45■□□□□ 0.38
CMTM3-202ENST00000424011 DAB2IPQ5VWQ8 1189 aa17.45■□□□□ 0.38
CMTM3-202ENST00000424011 ZDHHC24Q6UX98 284 aa17.45■□□□□ 0.38
CMTM3-202ENST00000424011 ALKAL1Q6UXT8 129 aa17.45■□□□□ 0.38
CMTM3-202ENST00000424011 EXD1Q8NHP7 514 aa17.45■□□□□ 0.38
CMTM3-202ENST00000424011 MCEEQ96PE7 176 aa17.45■□□□□ 0.38
CMTM3-202ENST00000424011 NT5C1AQ9BXI3 368 aa17.45■□□□□ 0.38
CMTM3-202ENST00000424011 MIS12Q9H081 205 aa17.45■□□□□ 0.38
CMTM3-202ENST00000424011 LRRC19Q9H756 370 aa17.45■□□□□ 0.38
CMTM3-202ENST00000424011 SYNCQ9H7C4 482 aa17.45■□□□□ 0.38
CMTM3-202ENST00000424011 UBQLN1Q9UMX0 589 aaKnown RBP17.45■□□□□ 0.38
CMTM3-202ENST00000424011 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.45■□□□□ 0.38
CMTM3-202ENST00000424011 M0QZ92 97 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 CD4P01730 458 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 RPLP2P05387 115 aaKnown RBP17.44■□□□□ 0.38
CMTM3-202ENST00000424011 COILP38432 576 aaPredicted RBP17.44■□□□□ 0.38
CMTM3-202ENST00000424011 SSR1P43307 286 aaKnown RBP17.44■□□□□ 0.38
CMTM3-202ENST00000424011 MTMR3Q13615 1198 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 GNASQ5JWF2 1037 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 PPP1R15BQ5SWA1 713 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 CCDC105Q8IYK2 499 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 NIPA2Q8N8Q9 360 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 PPP1R13LQ8WUF5 828 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 ATP6V1G3Q96LB4 118 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 TXLNGYQ9BZA5 131 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 TMBIM4Q9HC24 238 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 GRHL1Q9NZI5 618 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 RECQL4O94761 1208 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 KCNJ1P48048 391 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 NDST1P52848 882 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 PLTPP55058 493 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 RPL7AP62424 266 aaKnown RBP17.44■□□□□ 0.38
CMTM3-202ENST00000424011 SKOR1P84550 965 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 ZNF200P98182 395 aaPredicted RBP17.44■□□□□ 0.38
CMTM3-202ENST00000424011 ZNF844Q08AG5 666 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 BIRC2Q13490 618 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 NAIF1Q69YI7 327 aaPredicted RBP17.44■□□□□ 0.38
CMTM3-202ENST00000424011 RSPH3Q86UC2 560 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 CCDC50Q8IVM0 306 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 TMEM40Q8WWA1 233 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 TWNKQ96RR1 684 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 DNAI2Q9GZS0 605 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 NXF3Q9H4D5 531 aaKnown RBP17.44■□□□□ 0.38
CMTM3-202ENST00000424011 KLC4Q9NSK0 619 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 PARP2Q9UGN5 583 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 USTQ9Y2C2 406 aa17.44■□□□□ 0.38
CMTM3-202ENST00000424011 SIGLEC16A6NMB1 481 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 A6NNZ2 444 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 PPFIA2O75334 1257 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 MICAL2O94851 1124 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 RPL21P46778 160 aaKnown RBP17.43■□□□□ 0.38
CMTM3-202ENST00000424011 ATP1A2P50993 1020 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 HTRA3P83110 453 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 ZNF268Q14587 947 aaPredicted RBP17.43■□□□□ 0.38
CMTM3-202ENST00000424011 TUBB8Q3ZCM7 444 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 PTPN20Q4JDL3 420 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 TTC19Q6DKK2 380 aaPredicted RBP17.43■□□□□ 0.38
CMTM3-202ENST00000424011 YTHDF3Q7Z739 585 aaKnown RBP17.43■□□□□ 0.38
CMTM3-202ENST00000424011 FBXO25Q8TCJ0 367 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 RBM41Q96IZ5 413 aaKnown RBP17.43■□□□□ 0.38
CMTM3-202ENST00000424011 ZMAT2Q96NC0 199 aaKnown RBP17.43■□□□□ 0.38
CMTM3-202ENST00000424011 UPF3AQ9H1J1 476 aaKnown RBP17.43■□□□□ 0.38
CMTM3-202ENST00000424011 RABEP2Q9H5N1 569 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 HMGXB4Q9UGU5 601 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 ATP8A1Q9Y2Q0 1164 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 O00370 1275 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 GJB6O95452 261 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 KRT3P12035 628 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 SARNPP82979 210 aaKnown RBP17.43■□□□□ 0.38
CMTM3-202ENST00000424011 RCOR2Q8IZ40 523 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 FNIP1Q8TF40 1166 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 SLCO2A1Q92959 643 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 HERPUD2Q9BSE4 406 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 PTPN22Q9Y2R2 807 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 HES2Q9Y543 173 aa17.43■□□□□ 0.38
CMTM3-202ENST00000424011 KLHL33A6NCF5 533 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 M0QYV0 167 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 RARBP10826 455 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 PNPLA4P41247 253 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 TAS2R40P59535 323 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 PSMC1P62191 440 aaKnown RBP17.42■□□□□ 0.38
CMTM3-202ENST00000424011 NKX3-2P78367 333 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 TRIM32Q13049 653 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 ODF2Q5BJF6 829 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 CYP4A22Q5TCH4 519 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 C1orf54Q8WWF1 131 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 FAM129AQ9BZQ8 928 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 SLC24A3Q9HC58 644 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 DDX56Q9NY93 547 aaKnown RBP17.42■□□□□ 0.38
CMTM3-202ENST00000424011 SRRDQ9UH36 339 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms