RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 OR2I1PQ8NGU4 316 aa2.96□□□□□ -1.94
VPS13A-208ENST00000423463 SNX33Q8WV41 574 aa2.96□□□□□ -1.94
VPS13A-208ENST00000423463 ATXN2LQ8WWM7 1075 aaKnown RBP2.96□□□□□ -1.94
VPS13A-208ENST00000423463 NSUN4Q96CB9 384 aaKnown RBP2.96□□□□□ -1.94
VPS13A-208ENST00000423463 HOOK2Q96ED9 719 aa2.96□□□□□ -1.94
VPS13A-208ENST00000423463 CEP95Q96GE4 821 aa2.96□□□□□ -1.94
VPS13A-208ENST00000423463 MENTQ9BUN1 341 aa2.96□□□□□ -1.94
VPS13A-208ENST00000423463 KRTAP4-7Q9BYR0 210 aa2.96□□□□□ -1.94
VPS13A-208ENST00000423463 ASPSCR1Q9BZE9 553 aa2.96□□□□□ -1.94
VPS13A-208ENST00000423463 LDAHQ9H6V9 325 aa2.96□□□□□ -1.94
VPS13A-208ENST00000423463 GBA2Q9HCG7 927 aaPredicted RBP2.96□□□□□ -1.94
VPS13A-208ENST00000423463 ECHDC1Q9NTX5 307 aa2.96□□□□□ -1.94
VPS13A-208ENST00000423463 PCDHAC2Q9Y5I4 1007 aa2.96□□□□□ -1.94
VPS13A-208ENST00000423463 GPR45Q9Y5Y3 372 aa2.96□□□□□ -1.94
VPS13A-208ENST00000423463 CLRN2A0PK11 232 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 MTSS1O43312 755 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 ENTPD3O75355 529 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 BAG3O95817 575 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 GNAT2P19087 354 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 AGXTP21549 392 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 DGCR2P98153 550 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 RRP1BQ14684 758 aaKnown RBP2.95□□□□□ -1.94
VPS13A-208ENST00000423463 NOMO1Q15155 1222 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 PTPN21Q16825 1174 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 INAVAQ3KP66 663 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 ODR4Q5SWX8 454 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 ANKRD45Q5TZF3 282 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 C1QL3Q5VWW1 255 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 MBNL2Q5VZF2 373 aaKnown RBP2.95□□□□□ -1.94
VPS13A-208ENST00000423463 NAA16Q6N069 864 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-208ENST00000423463 CDC42EP5Q6NZY7 148 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 TAS1R1Q7RTX1 841 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 ARMC9Q7Z3E5 817 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 CERS3Q8IU89 383 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 SMC5Q8IY18 1101 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 FAM151AQ8WW52 585 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 RSAD2Q8WXG1 361 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 JADE3Q92613 823 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 EDAQ92838 391 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 IDI2Q9BXS1 227 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 VEZTQ9HBM0 779 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 PIH1D3Q9NQM4 214 aaKnown RBP2.95□□□□□ -1.94
VPS13A-208ENST00000423463 SCOCQ9UIL1 159 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 TUBD1Q9UJT1 453 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 ABT1Q9ULW3 272 aaKnown RBP2.95□□□□□ -1.94
VPS13A-208ENST00000423463 MROH7-TTC4A0A0A0MT08 1334 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 AOX1Q06278 1338 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 TTC41PQ6P2S7 1318 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 RPTORQ8N122 1335 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 PSME4Q14997 1843 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 COL1A1P02452 1464 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-208ENST00000423463 PMS2P1A4D2B8 440 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 TCP10L2B9ZVM9 353 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 NRP1O14786 923 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 ERC2O15083 957 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 PCDHGA12O60330 932 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 MTHFD2P13995 350 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 BTDP43251 543 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 SCNN1GP51170 649 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 HUNKP57058 714 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 NRN1LQ496H8 165 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 RGMBQ6NW40 437 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 DLK2Q6UY11 383 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 C1orf210Q8IVY1 113 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 RNF169Q8NCN4 708 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 IL17DQ8TAD2 202 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 ZNF480Q8WV37 535 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 STON2Q8WXE9 905 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 IL17RAQ96F46 866 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 CDK5RAP1Q96SZ6 601 aaKnown RBP2.95□□□□□ -1.94
VPS13A-208ENST00000423463 UHRF1Q96T88 793 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-208ENST00000423463 PDCD2LQ9BRP1 358 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 LSM14BQ9BX40 385 aaKnown RBP2.95□□□□□ -1.94
VPS13A-208ENST00000423463 BOLA2Q9H3K6 86 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 TRPS1Q9UHF7 1281 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 PCDHGA9Q9Y5G4 932 aaKnown RBP2.95□□□□□ -1.94
VPS13A-208ENST00000423463 PCDHGA8Q9Y5G5 932 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 PCDHGA7Q9Y5G6 932 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 PCDHGA6Q9Y5G7 932 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 PCDHGA3Q9Y5H0 932 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 A0A1B0GUL6 1792 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 CNTNAP1P78357 1384 aa2.95□□□□□ -1.94
VPS13A-208ENST00000423463 TNKSO95271 1327 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 UBE2Q2LH0YL09 131 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 GOLIM4O00461 696 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 HOXA3O43365 443 aaPredicted RBP2.94□□□□□ -1.94
VPS13A-208ENST00000423463 IDH1O75874 414 aaKnown RBP2.94□□□□□ -1.94
VPS13A-208ENST00000423463 IGHDP01880 384 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 AMHP03971 560 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 C1SP09871 688 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 GYPEP15421 78 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 FPR1P21462 350 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 PTPN7P35236 360 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 MAP2K2P36507 400 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 GZMKP49863 264 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 RABGGTBP53611 331 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 RHBDL3P58872 404 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 MEF2AQ02078 507 aaPredicted RBP2.94□□□□□ -1.94
VPS13A-208ENST00000423463 APBA1Q02410 837 aa2.94□□□□□ -1.94
VPS13A-208ENST00000423463 ODF1Q14990 250 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms