RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 FBXO28Q9NVF7 368 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.31■■□□□ 1.16
USP48-205ENST00000421625 hCG_1818297A0A087WSY0 165 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 TCRBV7S3A2A0A539 114 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 HLA-DRAP01903 254 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 BPIFB4P59827 614 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 EN1Q05925 392 aaPredicted RBP22.31■■□□□ 1.16
USP48-205ENST00000421625 BRDTQ58F21 947 aaPredicted RBP22.31■■□□□ 1.16
USP48-205ENST00000421625 ZC3H12AQ5D1E8 599 aaKnown RBP22.31■■□□□ 1.16
USP48-205ENST00000421625 MDH1BQ5I0G3 518 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 GPD1LQ8N335 351 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 AGO4Q9HCK5 861 aaKnown RBP22.31■■□□□ 1.16
USP48-205ENST00000421625 IP6K2Q9UHH9 426 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 PCDHB4Q9Y5E5 795 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 SLX4Q8IY92 1834 aa22.31■■□□□ 1.16
USP48-205ENST00000421625 H3BRJ5 948 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 CHRNA5P30532 468 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 DYNLT1P63172 113 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 DMP1Q13316 513 aaPredicted RBP22.3■■□□□ 1.16
USP48-205ENST00000421625 AOC3Q16853 763 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 SLC5A9Q2M3M2 681 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 C15orf39Q6ZRI6 1047 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 PHF13Q86YI8 300 aaPredicted RBP22.3■■□□□ 1.16
USP48-205ENST00000421625 CLPTM1LQ96KA5 538 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 GINM1Q9NU53 330 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 B2RBV5 119 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 ZC3H11AO75152 810 aaKnown RBP eCLIP22.3■■□□□ 1.16
USP48-205ENST00000421625 ITGAVP06756 1048 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 LYNP07948 512 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 ETV4P43268 484 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 BBS9Q3SYG4 887 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 WDR44Q5JSH3 913 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 USP37Q86T82 979 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 NKD2Q969F2 451 aaPredicted RBP22.3■■□□□ 1.16
USP48-205ENST00000421625 TDRD3Q9H7E2 651 aaKnown RBP22.3■■□□□ 1.16
USP48-205ENST00000421625 PARVAQ9NVD7 372 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 ANKRD31Q8N7Z5 1873 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 HNRNPDLO14979 420 aaKnown RBP22.3■■□□□ 1.16
USP48-205ENST00000421625 MT-ND3P03897 115 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 DHRS4L1P0CG22 281 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 PSMC5P62195 406 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 OGDHQ02218 1023 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 KLHL38Q2WGJ6 581 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 TKFCQ3LXA3 575 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 IZUMO2Q6UXV1 221 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 TREML1Q86YW5 311 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 FETUBQ9UGM5 382 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 SNCAIPQ9Y6H5 919 aa22.3■■□□□ 1.16
USP48-205ENST00000421625 MYH9P35579 1960 aaKnown RBP22.3■■□□□ 1.16
USP48-205ENST00000421625 LGR5O75473 907 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 ENO1P06733 434 aaKnown RBP22.29■■□□□ 1.16
USP48-205ENST00000421625 LAMB3Q13751 1172 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 PALM2Q8IXS6 379 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 ALKBH8Q96BT7 664 aaKnown RBP22.29■■□□□ 1.16
USP48-205ENST00000421625 MCEEQ96PE7 176 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 PDGFDQ9GZP0 370 aaPredicted RBP22.29■■□□□ 1.16
USP48-205ENST00000421625 APOBEC3GQ9HC16 384 aaKnown RBP22.29■■□□□ 1.16
USP48-205ENST00000421625 PDP2Q9P2J9 529 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 A8MXQ7 604 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 LYPLA2O95372 231 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 TGDSO95455 350 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 DLGAP5Q15398 846 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 TDRD10Q5VZ19 366 aaKnown RBP22.29■■□□□ 1.16
USP48-205ENST00000421625 PPIL6Q8IXY8 311 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 AGBL1Q96MI9 1066 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 TUBGCP5Q96RT8 1024 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 CSRNP1Q96S65 589 aa22.29■■□□□ 1.16
USP48-205ENST00000421625 PTPRJQ12913 1337 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 TMEM191CA6NGB0 347 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 TMEM191BP0C7N4 346 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 ANPEPP15144 967 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 CDKN2BP42772 138 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 RAP1GDS1P52306 607 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 TFDP3Q5H9I0 405 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 NAT8LQ8N9F0 302 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 VCPIP1Q96JH7 1222 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 TMEM63AO94886 807 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 TNNI1P19237 187 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 GSTT1P30711 240 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 C1QBPQ07021 282 aaKnown RBP22.28■■□□□ 1.16
USP48-205ENST00000421625 MCL1Q07820 350 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 CUL3Q13618 768 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 CHSY1Q86X52 802 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 RBM15BQ8NDT2 890 aaKnown RBP22.28■■□□□ 1.16
USP48-205ENST00000421625 SLC35B2Q8TB61 432 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 EPAS1Q99814 870 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 PHACTR1Q9C0D0 580 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 DDX43Q9NXZ2 648 aaKnown RBP22.28■■□□□ 1.16
USP48-205ENST00000421625 ZNRF3Q9ULT6 936 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 CHMP2BQ9UQN3 213 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 NRXN2Q9P2S2 1712 aa22.28■■□□□ 1.16
USP48-205ENST00000421625 USP1O94782 785 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 PYGBP11216 843 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 MRPS9P82933 396 aaKnown RBP22.27■■□□□ 1.16
USP48-205ENST00000421625 GSTA3Q16772 222 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 POTEAQ6S8J7 498 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 TRIM72Q6ZMU5 477 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 RIPOR1Q6ZS17 1223 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 IGDCC3Q8IVU1 814 aa22.27■■□□□ 1.16
USP48-205ENST00000421625 CCDC110Q8TBZ0 833 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms