RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SMG9Q9H0W8 520 aaKnown RBP18.63■□□□□ 0.57
MSH6-203ENST00000420813 RBM12Q9NTZ6 932 aaKnown RBP18.63■□□□□ 0.57
MSH6-203ENST00000420813 TDP1Q9NUW8 608 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 GTF3C4Q9UKN8 822 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 CYP2F1P24903 491 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 ASIC1P78348 528 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 PON2Q15165 354 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 DDR2Q16832 855 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 DUOXA2Q1HG44 320 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 EPM2AIP1Q7L775 607 aaPredicted RBP18.62■□□□□ 0.57
MSH6-203ENST00000420813 CBWD2Q8IUF1 395 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 WDR49Q8IV35 697 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 OR5B17Q8NGF7 314 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 TTC8Q8TAM2 541 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 ZNF507Q8TCN5 953 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 USP13Q92995 863 aaPredicted RBP18.62■□□□□ 0.57
MSH6-203ENST00000420813 HPS3Q969F9 1004 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 SNX21Q969T3 373 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 DHX58Q96C10 678 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 HPDLQ96IR7 371 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 MAGEF1Q9HAY2 307 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 GKN1Q9NS71 199 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 HSPBP1Q9NZL4 362 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 TFIP11Q9UBB9 837 aaKnown RBP18.62■□□□□ 0.57
MSH6-203ENST00000420813 GMEB2Q9UKD1 530 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 RAB23Q9ULC3 237 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 MAGED2Q9UNF1 606 aaPredicted RBP18.62■□□□□ 0.57
MSH6-203ENST00000420813 UBE4BO95155 1302 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 PTPRJQ12913 1337 aa18.62■□□□□ 0.57
MSH6-203ENST00000420813 SDHBP21912 280 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 HOXA6P31267 233 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 CNR2P34972 360 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 HOXD13P35453 343 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 MAGEA11P43364 429 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 SNRPFP62306 86 aaKnown RBP18.61■□□□□ 0.57
MSH6-203ENST00000420813 RUNX3Q13761 415 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 FAM26FQ5R3K3 315 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 LMBRD2Q68DH5 695 aaPredicted RBP18.61■□□□□ 0.57
MSH6-203ENST00000420813 TXNDC8Q6A555 127 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 FAM171BQ6P995 826 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 SHC4Q6S5L8 630 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 C4orf50Q6ZRC1 276 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 Q6ZS52 159 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 DGLUCYQ7Z3D6 616 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 SPATA2LQ8IUW3 424 aaPredicted RBP18.61■□□□□ 0.57
MSH6-203ENST00000420813 C7orf25Q9BPX7 421 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 CCL26Q9Y258 94 aa18.61■□□□□ 0.57
MSH6-203ENST00000420813 MYO16Q9Y6X6 1858 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 K7ESF4 209 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 TADA3O75528 432 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 LMNB2Q03252 620 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 MAPRE1Q15691 268 aaKnown RBP18.6■□□□□ 0.57
MSH6-203ENST00000420813 SDHAF4Q5VUM1 108 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 LAIR1Q6GTX8 287 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 STKLD1Q8NE28 680 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 KBTBD7Q8WVZ9 684 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 CEP295NLQ96MC4 621 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 HPS4Q9NQG7 708 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 CDH9Q9ULB4 789 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 DNAH14Q0VDD8 3507 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 KIAA1549LQ6ZVL6 1849 aa18.6■□□□□ 0.57
MSH6-203ENST00000420813 PRR5-ARHGAP8B1AHC4 643 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 ARHGAP8P85298 464 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 AMPD2Q01433 879 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 FAM160A1Q05DH4 1040 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 EHHADHQ08426 723 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 PDGFRLQ15198 375 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 SNRNP35Q16560 246 aaKnown RBP18.59■□□□□ 0.57
MSH6-203ENST00000420813 CC2D1AQ6P1N0 951 aaPredicted RBP18.59■□□□□ 0.57
MSH6-203ENST00000420813 VSTM1Q6UX27 236 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 UNC13DQ70J99 1090 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 LONP2Q86WA8 852 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 SYT15Q9BQS2 421 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 EBF3Q9H4W6 596 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 AGPAT3Q9NRZ7 376 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 EML5Q05BV3 1969 aa18.59■□□□□ 0.57
MSH6-203ENST00000420813 CHURC1-FNTBB4DL54 471 aa18.58■□□□□ 0.56
MSH6-203ENST00000420813 TRDMT1O14717 391 aaKnown RBP18.58■□□□□ 0.56
MSH6-203ENST00000420813 TGFB1I1O43294 461 aa18.58■□□□□ 0.56
MSH6-203ENST00000420813 HCRTO43612 131 aa18.58■□□□□ 0.56
MSH6-203ENST00000420813 LRP3O75074 770 aa18.58■□□□□ 0.56
MSH6-203ENST00000420813 TGM1P22735 817 aa18.58■□□□□ 0.56
MSH6-203ENST00000420813 WARSP23381 471 aaKnown RBP18.58■□□□□ 0.56
MSH6-203ENST00000420813 FNTBP49356 437 aa18.58■□□□□ 0.56
MSH6-203ENST00000420813 CCDC142Q17RM4 750 aa18.58■□□□□ 0.56
MSH6-203ENST00000420813 RSPO4Q2I0M5 234 aaPredicted RBP18.58■□□□□ 0.56
MSH6-203ENST00000420813 TMEM196Q5HYL7 178 aa18.58■□□□□ 0.56
MSH6-203ENST00000420813 TRAPPC11Q7Z392 1133 aa18.58■□□□□ 0.56
MSH6-203ENST00000420813 FSIP1Q8NA03 581 aa18.58■□□□□ 0.56
MSH6-203ENST00000420813 RIN3Q8TB24 985 aa18.58■□□□□ 0.56
MSH6-203ENST00000420813 SPATA17Q96L03 361 aa18.58■□□□□ 0.56
MSH6-203ENST00000420813 MAGEC2Q9UBF1 373 aaPredicted RBP18.58■□□□□ 0.56
MSH6-203ENST00000420813 TRAV19A0A0A6YYK7 116 aa18.57■□□□□ 0.56
MSH6-203ENST00000420813 POLR2DO15514 142 aaKnown RBP18.57■□□□□ 0.56
MSH6-203ENST00000420813 ATP2C2O75185 946 aa18.57■□□□□ 0.56
MSH6-203ENST00000420813 RETP07949 1114 aa18.57■□□□□ 0.56
MSH6-203ENST00000420813 FAM163BP0C2L3 166 aa18.57■□□□□ 0.56
MSH6-203ENST00000420813 USP17L7P0C7H9 530 aa18.57■□□□□ 0.56
MSH6-203ENST00000420813 DMWDQ09019 674 aa18.57■□□□□ 0.56
MSH6-203ENST00000420813 GRSF1Q12849 480 aaKnown RBP eCLIP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms