RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 K7ESF4 209 aa18.55■□□□□ 0.56
PTCD1-202ENST00000419981 ARHGAP8P85298 464 aa18.55■□□□□ 0.56
PTCD1-202ENST00000419981 DMWDQ09019 674 aa18.55■□□□□ 0.56
PTCD1-202ENST00000419981 RUNX3Q13761 415 aa18.55■□□□□ 0.56
PTCD1-202ENST00000419981 SIM2Q14190 667 aaPredicted RBP18.55■□□□□ 0.56
PTCD1-202ENST00000419981 SURF1Q15526 300 aa18.55■□□□□ 0.56
PTCD1-202ENST00000419981 DDR2Q16832 855 aa18.55■□□□□ 0.56
PTCD1-202ENST00000419981 LMBRD2Q68DH5 695 aaPredicted RBP18.55■□□□□ 0.56
PTCD1-202ENST00000419981 LONP2Q86WA8 852 aa18.55■□□□□ 0.56
PTCD1-202ENST00000419981 OSTM1Q86WC4 334 aa18.55■□□□□ 0.56
PTCD1-202ENST00000419981 SPATA2LQ8IUW3 424 aaPredicted RBP18.55■□□□□ 0.56
PTCD1-202ENST00000419981 TRMT2BQ96GJ1 504 aaKnown RBP18.55■□□□□ 0.56
PTCD1-202ENST00000419981 FAM83CQ9BQN1 747 aa18.55■□□□□ 0.56
PTCD1-202ENST00000419981 CUEDC2Q9H467 287 aa18.55■□□□□ 0.56
PTCD1-202ENST00000419981 INTS13Q9NVM9 706 aa18.55■□□□□ 0.56
PTCD1-202ENST00000419981 DNAH14Q0VDD8 3507 aa18.55■□□□□ 0.56
PTCD1-202ENST00000419981 ZNF233A6NK53 670 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 GABRDO14764 452 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 SPTLC2O15270 562 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 TADA3O75528 432 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 NOL4O94818 638 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 TNNC2P02585 160 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 CNR2P34972 360 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 SOWAHAQ2M3V2 549 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 CFAP221Q4G0U5 840 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 HEATR6Q6AI08 1181 aaKnown RBP18.54■□□□□ 0.56
PTCD1-202ENST00000419981 TRIM68Q6AZZ1 485 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 CC2D1AQ6P1N0 951 aaPredicted RBP18.54■□□□□ 0.56
PTCD1-202ENST00000419981 MON1AQ86VX9 555 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 GLIS3Q8NEA6 775 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 FUBP3Q96I24 572 aaKnown RBP eCLIP18.54■□□□□ 0.56
PTCD1-202ENST00000419981 ZNF396Q96N95 335 aaPredicted RBP18.54■□□□□ 0.56
PTCD1-202ENST00000419981 TRIM9Q9C026 710 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 EBF3Q9H4W6 596 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 PARD6AQ9NPB6 346 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 HPS4Q9NQG7 708 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 KBTBD4Q9NVX7 518 aa18.54■□□□□ 0.56
PTCD1-202ENST00000419981 CDV3Q9UKY7 258 aaKnown RBP18.54■□□□□ 0.56
PTCD1-202ENST00000419981 PTPRJQ12913 1337 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 EIF3DO15371 548 aaKnown RBP eCLIP18.53■□□□□ 0.56
PTCD1-202ENST00000419981 HCRTO43612 131 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 PPP6R2O75170 966 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 TGM1P22735 817 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 ASIC1P78348 528 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 AMPD3Q01432 767 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 SPEM2Q0P670 501 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 ZNF268Q14587 947 aaPredicted RBP18.53■□□□□ 0.56
PTCD1-202ENST00000419981 E2F4Q16254 413 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 CCDC142Q17RM4 750 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 DPH6Q7L8W6 267 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.53■□□□□ 0.56
PTCD1-202ENST00000419981 CBWD2Q8IUF1 395 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 OR5B17Q8NGF7 314 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 HPS3Q969F9 1004 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 HPDLQ96IR7 371 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 MYRFLQ96LU7 910 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 TRPC7Q9HCX4 862 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 C2orf42Q9NWW7 574 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 HSPBP1Q9NZL4 362 aa18.53■□□□□ 0.56
PTCD1-202ENST00000419981 THADAQ6YHU6 1953 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 HRO43593 1189 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 LRP3O75074 770 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 RETP07949 1114 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 AMPD2Q01433 879 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 FAM160A1Q05DH4 1040 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 GRSF1Q12849 480 aaKnown RBP eCLIP18.52■□□□□ 0.56
PTCD1-202ENST00000419981 SRSF5Q13243 272 aaKnown RBP18.52■□□□□ 0.56
PTCD1-202ENST00000419981 DUOXA2Q1HG44 320 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 TMEM196Q5HYL7 178 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 C4orf50Q6ZRC1 276 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 WDR49Q8IV35 697 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 SCN4BQ8IWT1 228 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 RIN3Q8TB24 985 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 DHX58Q96C10 678 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 SYT15Q9BQS2 421 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 KIAA1586Q9HCI6 787 aa18.52■□□□□ 0.56
PTCD1-202ENST00000419981 TFIP11Q9UBB9 837 aaKnown RBP18.52■□□□□ 0.56
PTCD1-202ENST00000419981 TRAV19A0A0A6YYK7 116 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 OTOL1A6NHN0 477 aaPredicted RBP18.51■□□□□ 0.55
PTCD1-202ENST00000419981 TRDMT1O14717 391 aaKnown RBP18.51■□□□□ 0.55
PTCD1-202ENST00000419981 CUTAO60888 179 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 YEATS4O95619 227 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 USP17L7P0C7H9 530 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 ARSAP15289 507 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 HOXA6P31267 233 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 MAGEA11P43364 429 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 MTF1Q14872 753 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 PDGFRLQ15198 375 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 FAM26FQ5R3K3 315 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 FSTL4Q6MZW2 842 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 FAM171BQ6P995 826 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 WDR5BQ86VZ2 330 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 FSIP1Q8NA03 581 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 KBTBD7Q8WVZ9 684 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 CHFRQ96EP1 664 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 BACH2Q9BYV9 841 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 MAGEC2Q9UBF1 373 aaPredicted RBP18.51■□□□□ 0.55
PTCD1-202ENST00000419981 CDH9Q9ULB4 789 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 CEP192Q8TEP8 1941 aa18.51■□□□□ 0.55
PTCD1-202ENST00000419981 UBE4BO95155 1302 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms