RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 C15orf38-AP3S2A0A0A6YYH1 394 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 PNMA6FA0A0J9YX94 578 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 E5RJQ4 531 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 BUD23O43709 281 aaKnown RBP15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 MAGEC1O60732 1142 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 ATF7P17544 494 aaPredicted RBP15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 CHN2P52757 468 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 ZNF543Q08ER8 600 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 KRT72Q14CN4 511 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 DLGAP5Q15398 846 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 SLC44A4Q53GD3 710 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 SH3D19Q5HYK7 790 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 ARPINQ7Z6K5 226 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 SHCBP1LQ9BZQ2 653 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 KLHL4Q9C0H6 718 aa15.41■□□□□ 0.06
NCKIPSD-204ENST00000416649 MYOCOSA0A1B0GUC4 107 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 PDE5AO76074 875 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 EGFRP00533 1210 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 CDK4P11802 303 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 KRT10P13645 584 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 RPA1P27694 616 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 FMO1Q01740 532 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 PLOD1Q02809 727 aaPredicted RBP15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 RASA3Q14644 834 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 BMT2Q1RMZ1 405 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 ABCB5Q2M3G0 1257 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 LRRC8BQ6P9F7 803 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 PAOXQ6QHF9 649 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 ARID3BQ8IVW6 561 aaPredicted RBP15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 EFCAB3Q8N7B9 438 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 ETNPPLQ8TBG4 499 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 CYP4F11Q9HBI6 524 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 USP29Q9HBJ7 922 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 CIDEBQ9UHD4 219 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 LRRC37AA6NMS7 1700 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 ATP2A1O14983 1001 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 VILLO15195 856 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 CYP1A2P05177 515 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 SLC18A1P54219 525 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 GEMIN4P57678 1058 aaKnown RBP15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 SLC25A3Q00325 362 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 PPP3CAQ08209 521 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 MSLNQ13421 630 aaPredicted RBP15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 ACAP1Q15027 740 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 ODR4Q5SWX8 454 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 SLFN13Q68D06 897 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 ANKRD23Q86SG2 305 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 TDRPQ86YL5 185 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 LZICQ8WZA0 190 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 PAFAH2Q99487 392 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 ANO3Q9BYT9 981 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 UVRAGQ9P2Y5 699 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 TBC1D30Q9Y2I9 924 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 KAT6AQ92794 2004 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 MYH11P35749 1972 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 hCG_1984214I3L0E3 225 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 SORBS2O94875 1100 aaKnown RBP15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 EIF4BP23588 611 aaKnown RBP15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 SSTR3P32745 418 aaPredicted RBP15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 NADK2Q4G0N4 442 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 RABGAP1LQ5R372 815 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 RINT1Q6NUQ1 792 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 SLFN12Q8IYM2 578 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 ZNF713Q8N859 430 aaPredicted RBP15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 ZBTB8BQ8NAP8 495 aaPredicted RBP15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 LMO3Q8TAP4 145 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 ZNF395Q9H8N7 513 aaPredicted RBP15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 APPL1Q9UKG1 709 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 ADAMTS6Q9UKP5 1117 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 FZD1Q9UP38 647 aa15.4■□□□□ 0.06
NCKIPSD-204ENST00000416649 DNAJC6O75061 913 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 MT-ND3P03897 115 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 PDE1BQ01064 536 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 GAD2Q05329 585 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 IYDQ6PHW0 289 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 CENPUQ71F23 418 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 POU5F2Q8N7G0 328 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 FAM172AQ8WUF8 416 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 VPS11Q9H270 941 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 S100A14Q9HCY8 104 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 DNPEPQ9ULA0 475 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 SH3GLB1Q9Y371 365 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 GJA3Q9Y6H8 435 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 TNS1Q9HBL0 1735 aaKnown RBP15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 ATP9BO43861 1147 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 DKC1O60832 514 aaKnown RBP eCLIP15.39■□□□□ 0.051e-6■■□□□ 12.2
NCKIPSD-204ENST00000416649 MTA2O94776 668 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 GZMAP12544 262 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 KRT5P13647 590 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 ZNF200P98182 395 aaPredicted RBP15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 DCTN2Q13561 401 aaKnown RBP15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 HIC1Q14526 733 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 FBXL19Q6PCT2 694 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 ZNF276Q8N554 614 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 ACER1Q8TDN7 264 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 PYROXD1Q8WU10 500 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 MECRQ9BV79 373 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 PARVGQ9HBI0 331 aa15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 TMOD2Q9NZR1 351 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms