RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 HMGXB4Q9UGU5 601 aa17.54■□□□□ 0.4
LINC00398-201ENST00000414407 ATP8B3O60423 1300 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 PES1O00541 588 aaKnown RBP17.53■□□□□ 0.4
LINC00398-201ENST00000414407 PTPN2P17706 415 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 CYP2F1P24903 491 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 COPB1P53618 953 aaKnown RBP17.53■□□□□ 0.4
LINC00398-201ENST00000414407 TPM4P67936 248 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 CYP27A1Q02318 531 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 CCDC142Q17RM4 750 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 FKBP15Q5T1M5 1219 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 IQCEQ6IPM2 695 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 APTXQ7Z2E3 356 aaKnown RBP17.53■□□□□ 0.4
LINC00398-201ENST00000414407 ARHGEF19Q8IW93 802 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 TTC9BQ8N6N2 239 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 LEMD2Q8NC56 503 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 TMEM176AQ96HP8 235 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 ZNF512Q96ME7 567 aaPredicted RBP17.53■□□□□ 0.4
LINC00398-201ENST00000414407 TWNKQ96RR1 684 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 SEPT5Q99719 369 aaPredicted RBP17.53■□□□□ 0.4
LINC00398-201ENST00000414407 PHF7Q9BWX1 381 aaPredicted RBP17.53■□□□□ 0.4
LINC00398-201ENST00000414407 B3GNT5Q9BYG0 378 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 ELOVL4Q9GZR5 314 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 CEP72Q9P209 647 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 APEX2Q9UBZ4 518 aa17.53■□□□□ 0.4
LINC00398-201ENST00000414407 SPTBN5Q9NRC6 3674 aaKnown RBP17.53■□□□□ 0.4
LINC00398-201ENST00000414407 LGALS16A8MUM7 142 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 ATP1A3P13637 1013 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 IL9P15248 144 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 ACO1P21399 889 aaKnown RBP17.52■□□□□ 0.4
LINC00398-201ENST00000414407 RAD23BP54727 409 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 MFAP3P55082 362 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 ZNF445P59923 1031 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 VEPH1Q14D04 833 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 RRAGAQ7L523 313 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 ITIH5Q86UX2 942 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 SLC4A11Q8NBS3 891 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 FEZF2Q8TBJ5 459 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 PSMG2Q969U7 264 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 TSPY26PQ9H489 355 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 POMKQ9H5K3 350 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 SIX2Q9NPC8 291 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 UBE2TQ9NPD8 197 aaPredicted RBP17.52■□□□□ 0.4
LINC00398-201ENST00000414407 DNMT3BQ9UBC3 853 aaKnown RBP17.52■□□□□ 0.4
LINC00398-201ENST00000414407 KIAA1257Q9ULG3 409 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 CNTN6Q9UQ52 1028 aa17.52■□□□□ 0.4
LINC00398-201ENST00000414407 CLUHO75153 1309 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 TRIM66O15016 1216 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 PAEPP09466 180 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 ATF6P18850 670 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 RFX1P22670 979 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 BDNFP23560 247 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 EPHA5P54756 1037 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 KCNMA1Q12791 1236 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 DPY19L2P1Q6NXN4 242 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 PAQR9Q6ZVX9 377 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 GRASPQ7Z6J2 395 aaPredicted RBP17.51■□□□□ 0.39
LINC00398-201ENST00000414407 LUZP1Q86V48 1076 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 FUKQ8N0W3 1084 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 SPATA17Q96L03 361 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 C8orf48Q96LL4 319 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 KREMEN1Q96MU8 473 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 HNRNPABQ99729 332 aaKnown RBP17.51■□□□□ 0.39
LINC00398-201ENST00000414407 LPIN3Q9BQK8 851 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 PLCB1Q9NQ66 1216 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 USTQ9Y2C2 406 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 DAAM1Q9Y4D1 1078 aa17.51■□□□□ 0.39
LINC00398-201ENST00000414407 GOLGA6L19H0YKK7 550 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 SOAT2O75908 522 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 MICAL2O94851 1124 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 RHOP08100 348 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 ORC1Q13415 861 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 PABPC1LQ4VXU2 614 aaKnown RBP17.5■□□□□ 0.39
LINC00398-201ENST00000414407 ZNF394Q53GI3 561 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 TMEM270Q6UE05 265 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 DNAJB7Q7Z6W7 309 aaPredicted RBP17.5■□□□□ 0.39
LINC00398-201ENST00000414407 FAM35AQ86V20 835 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 ADHFE1Q8IWW8 467 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 C12orf29Q8N999 325 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 SLC2A14Q8TDB8 520 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 KAT5Q92993 513 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 CYFIP2Q96F07 1278 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 SMARCD1Q96GM5 515 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 HEXIM2Q96MH2 286 aaKnown RBP17.5■□□□□ 0.39
LINC00398-201ENST00000414407 ZNF518BQ9C0D4 1074 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00398-201ENST00000414407 CDH22Q9UJ99 828 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 PCDHB4Q9Y5E5 795 aa17.5■□□□□ 0.39
LINC00398-201ENST00000414407 ZNF197O14709 1029 aa17.49■□□□□ 0.39
LINC00398-201ENST00000414407 FGF19O95750 216 aa17.49■□□□□ 0.39
LINC00398-201ENST00000414407 CSH1P0DML2 217 aa17.49■□□□□ 0.39
LINC00398-201ENST00000414407 CSH2P0DML3 217 aa17.49■□□□□ 0.39
LINC00398-201ENST00000414407 ANXA13P27216 316 aa17.49■□□□□ 0.39
LINC00398-201ENST00000414407 GRIK1P39086 918 aa17.49■□□□□ 0.39
LINC00398-201ENST00000414407 CDR1P51861 262 aa17.49■□□□□ 0.39
LINC00398-201ENST00000414407 DDR2Q16832 855 aa17.49■□□□□ 0.39
LINC00398-201ENST00000414407 FILIP1LQ4L180 1135 aa17.49■□□□□ 0.39
LINC00398-201ENST00000414407 CYP4A22Q5TCH4 519 aa17.49■□□□□ 0.39
LINC00398-201ENST00000414407 KLHDC7AQ5VTJ3 777 aa17.49■□□□□ 0.39
LINC00398-201ENST00000414407 ARHGAP17Q68EM7 881 aa17.49■□□□□ 0.39
LINC00398-201ENST00000414407 ERGIC2Q96RQ1 377 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms