RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	SLC7A14	Q8TBB6	771 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	PCED1B	Q96HM7	432 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	SPAG5	Q96R06	1193 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	MED10	Q9BTT4	135 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	TMLHE	Q9NVH6	421 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.99	□□□□□ -0.17
SF1-206	ENST00000413725	CNTN6	Q9UQ52	1028 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	ANAPC1	Q9H1A4	1944 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	DENND4A	Q7Z401	1863 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	PRUNE2	Q8WUY3	3088 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	TBX10	O75333	385 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	ZMYND10	O75800	440 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	NOL4	O94818	638 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	SEC24A	O95486	1093 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	LRG1	P02750	347 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	VDR	P11473	427 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	CD19	P15391	556 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	HOXB8	P17481	243 aa	Predicted RBP	13.98	□□□□□ -0.17
SF1-206	ENST00000413725	HOXA9	P31269	272 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	RBM10	P98175	930 aa	Known RBP	13.98	□□□□□ -0.17
SF1-206	ENST00000413725	DUSP4	Q13115	394 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	DRAP1	Q14919	205 aa	Predicted RBP	13.98	□□□□□ -0.17
SF1-206	ENST00000413725	SGO2	Q562F6	1265 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	ANKRD54	Q6NXT1	300 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	CACNA2D4	Q7Z3S7	1137 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	CYFIP2	Q96F07	1278 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	SMARCD1	Q96GM5	515 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	SEPT5	Q99719	369 aa	Predicted RBP	13.98	□□□□□ -0.17
SF1-206	ENST00000413725	NUP58	Q9BVL2	599 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	NAA15	Q9BXJ9	866 aa	Known RBP	13.98	□□□□□ -0.17
SF1-206	ENST00000413725	STK33	Q9BYT3	514 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	TRIM5	Q9C035	493 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	NLRC4	Q9NPP4	1024 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	FAM49B	Q9NUQ9	324 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	ZDHHC7	Q9NXF8	308 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	CEP72	Q9P209	647 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	KIAA1257	Q9ULG3	409 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	INSL5	Q9Y5Q6	135 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	DOCK8	Q8NF50	2099 aa		13.98	□□□□□ -0.17
SF1-206	ENST00000413725	ITIH6	Q6UXX5	1313 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725		F8VZ95	297 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	EPHB6	O15197	1021 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	VNN2	O95498	520 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
SF1-206	ENST00000413725	HAPLN1	P10915	354 aa	Predicted RBP	13.97	□□□□□ -0.17
SF1-206	ENST00000413725	CCDC130	P13994	396 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	BDNF	P23560	247 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	MAGEA11	P43364	429 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	ALDH1A3	P47895	512 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	ZNF132	P52740	706 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	RPL10A	P62906	217 aa	Known RBP	13.97	□□□□□ -0.17
SF1-206	ENST00000413725	PTPN21	Q16825	1174 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	CCDC142	Q17RM4	750 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	VSTM1	Q6UX27	236 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	FAM35A	Q86V20	835 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	ELMOD1	Q8N336	334 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	C12orf29	Q8N999	325 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	SLC2A14	Q8TDB8	520 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	HLA-C	Q95604	372 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	IQCD	Q96DY2	449 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	HNRNPAB	Q99729	332 aa	Known RBP	13.97	□□□□□ -0.17
SF1-206	ENST00000413725	LPIN3	Q9BQK8	851 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	B3GNT5	Q9BYG0	378 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	UBE2Z	Q9H832	354 aa	Predicted RBP	13.97	□□□□□ -0.17
SF1-206	ENST00000413725	COG5	Q9UP83	839 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	SLC27A5	Q9Y2P5	690 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	YIPF1	Q9Y548	306 aa		13.97	□□□□□ -0.17
SF1-206	ENST00000413725	RNF225	M0QZC1	329 aa	Predicted RBP	13.96	□□□□□ -0.17
SF1-206	ENST00000413725	FOXN3	O00409	490 aa	Predicted RBP	13.96	□□□□□ -0.17
SF1-206	ENST00000413725	CLDN5	O00501	218 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	TRIM66	O15016	1216 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	MED7	O43513	233 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	XYLB	O75191	536 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	CYP2F1	P24903	491 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	ANXA13	P27216	316 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	ADORA2B	P29275	332 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	GNA15	P30679	374 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	PBX1	P40424	430 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	STAT1	P42224	750 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	CDR1	P51861	262 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	EPHB3	P54753	998 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	BPIFB4	P59827	614 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	PTK2	Q05397	1052 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	TWF1	Q12792	350 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	VEPH1	Q14D04	833 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	STIL	Q15468	1287 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	FIGN	Q5HY92	759 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	RARS2	Q5T160	578 aa	Known RBP	13.96	□□□□□ -0.17
SF1-206	ENST00000413725	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.96	□□□□□ -0.17
SF1-206	ENST00000413725	ARHGAP17	Q68EM7	881 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	CES5A	Q6NT32	575 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	FMNL3	Q8IVF7	1028 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	FAM71A	Q8IYT1	594 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	FUK	Q8N0W3	1084 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	TTC9B	Q8N6N2	239 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	CMAS	Q8NFW8	434 aa	Predicted RBP	13.96	□□□□□ -0.17
SF1-206	ENST00000413725	EDEM3	Q9BZQ6	932 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	ZNF518B	Q9C0D4	1074 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	CRISPLD1	Q9H336	500 aa		13.96	□□□□□ -0.17
SF1-206	ENST00000413725	KRT82	Q9NSB4	513 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms