RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 ANAPC7Q9UJX3 599 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 ARIH1Q9Y4X5 557 aaPredicted RBP14.65□□□□□ -0.06
DUSP28-202ENST00000405954 PRR5-ARHGAP8B1AHC4 643 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 MAGEC1O60732 1142 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 TRIM49P0CI25 452 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 TRIM49CP0CI26 452 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 EEF1B2P24534 225 aaKnown RBP14.65□□□□□ -0.06
DUSP28-202ENST00000405954 COPAP53621 1224 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 ARHGAP8P85298 464 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 GRB10Q13322 594 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 UBAP2LQ14157 1087 aaKnown RBP14.65□□□□□ -0.06
DUSP28-202ENST00000405954 SMUG1Q53HV7 270 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 SLFN11Q7Z7L1 901 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 HEATR4Q86WZ0 1026 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 LNX1Q8TBB1 728 aaPredicted RBP14.65□□□□□ -0.06
DUSP28-202ENST00000405954 ZNF398Q8TD17 642 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 COPS7BQ9H9Q2 264 aaPredicted RBP14.65□□□□□ -0.06
DUSP28-202ENST00000405954 RABGEF1Q9UJ41 708 aa14.65□□□□□ -0.06
DUSP28-202ENST00000405954 MEIS1O00470 390 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 SERPINB7O75635 380 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 C6orf222P0C671 652 aaPredicted RBP14.64□□□□□ -0.07
DUSP28-202ENST00000405954 ADAM17P78536 824 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 RSPH3Q86UC2 560 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 NUDCD3Q8IVD9 361 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 PPM1KQ8N3J5 372 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 RNF148Q8N7C7 305 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 USP33Q8TEY7 942 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 LRRC15Q8TF66 581 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 BORCS5Q969J3 196 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 DYNLL2Q96FJ2 89 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 C10orf88Q9H8K7 445 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 NUP188Q5SRE5 1749 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 HSPA8P11142 646 aaKnown RBP14.64□□□□□ -0.07
DUSP28-202ENST00000405954 MRPS22P82650 360 aaKnown RBP14.64□□□□□ -0.07
DUSP28-202ENST00000405954 ADRM1Q16186 407 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 ATG16L1Q676U5 607 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 CENPSQ8N2Z9 138 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 SLC44A5Q8NCS7 719 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 PPP1R10Q96QC0 940 aaKnown RBP14.64□□□□□ -0.07
DUSP28-202ENST00000405954 TLE6Q9H808 572 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 TRPC5Q9UL62 973 aaPredicted RBP14.64□□□□□ -0.07
DUSP28-202ENST00000405954 CFAP99D6REC4 459 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 PLA2G4BP0C869 781 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 KRT5P13647 590 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 MSX2P35548 267 aaPredicted RBP14.64□□□□□ -0.07
DUSP28-202ENST00000405954 SEC23AQ15436 765 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 CTC1Q2NKJ3 1217 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 TMC7Q7Z402 723 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 ERI1Q8IV48 349 aaKnown RBP14.64□□□□□ -0.07
DUSP28-202ENST00000405954 COQ7Q99807 217 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 TRPV6Q9H1D0 765 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 TPK1Q9H3S4 243 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 NRDE2Q9H7Z3 1164 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 PCDH12Q9NPG4 1184 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 ACP6Q9NPH0 428 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 GIN1Q9NXP7 522 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 STK32BQ9NY57 414 aa14.64□□□□□ -0.07
DUSP28-202ENST00000405954 SCHIP1Q9P0W5 487 aaPredicted RBP14.64□□□□□ -0.07
DUSP28-202ENST00000405954 ARHGEF37A1IGU5 675 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 ZMPSTE24O75844 475 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 CHRNB2P17787 502 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 NR4A1P22736 598 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 PRKCIP41743 596 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 ARSEP51690 589 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 TLR1Q15399 786 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 ZNF786Q8N393 782 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 C4orf32Q8N8J7 132 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 TMEM260Q9NX78 707 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 ZBBXA8MT70 800 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 AIM2O14862 343 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 TDP2O95551 362 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 NR3C1P04150 777 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 CYP2C9P11712 490 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 NPY5RQ15761 445 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 ZNF423Q2M1K9 1284 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 RALGPS1Q5JS13 557 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 C3orf62Q6ZUJ4 267 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 DENND5BQ6ZUT9 1274 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 SKA1Q96BD8 255 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 MAK16Q9BXY0 300 aaKnown RBP14.63□□□□□ -0.07
DUSP28-202ENST00000405954 LRRC4BQ9NT99 713 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 ADAMTS6Q9UKP5 1117 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 LAMB4A4D0S4 1761 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 COL4A1P02462 1669 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 ADAMTS7Q9UKP4 1686 aa14.63□□□□□ -0.07
DUSP28-202ENST00000405954 CYTH3O43739 400 aa14.62□□□□□ -0.07
DUSP28-202ENST00000405954 CHEK2O96017 543 aa14.62□□□□□ -0.07
DUSP28-202ENST00000405954 MYCLP1P12525 358 aaPredicted RBP14.62□□□□□ -0.07
DUSP28-202ENST00000405954 PRDX5P30044 214 aa14.62□□□□□ -0.07
DUSP28-202ENST00000405954 ATICP31939 592 aa14.62□□□□□ -0.07
DUSP28-202ENST00000405954 CASP4P49662 377 aa14.62□□□□□ -0.07
DUSP28-202ENST00000405954 TRAF2Q12933 501 aa14.62□□□□□ -0.07
DUSP28-202ENST00000405954 ARSHQ5FYA8 562 aa14.62□□□□□ -0.07
DUSP28-202ENST00000405954 SYCP2LQ5T4T6 812 aa14.62□□□□□ -0.07
DUSP28-202ENST00000405954 PTCD3Q96EY7 689 aaKnown RBP14.62□□□□□ -0.07
DUSP28-202ENST00000405954 EHD1Q9H4M9 534 aa14.62□□□□□ -0.07
DUSP28-202ENST00000405954 NOL6Q9H6R4 1146 aaKnown RBP14.62□□□□□ -0.07
DUSP28-202ENST00000405954 DDX25Q9UHL0 483 aaKnown RBP14.62□□□□□ -0.07
DUSP28-202ENST00000405954 GNEQ9Y223 722 aaKnown RBP14.62□□□□□ -0.07
DUSP28-202ENST00000405954 PHRF1Q9P1Y6 1649 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms