RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 ATP2A1O14983 1001 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 MAP3K13O43283 966 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 BGNP21810 368 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 YWHAGP61981 247 aaKnown RBP eCLIP11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 SNRPFP62306 86 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 TMEM132AQ24JP5 1023 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 KIAA1217Q5T5P2 1943 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 CAPRIN2Q6IMN6 1127 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 TRIM50Q86XT4 487 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 ZNF677Q86XU0 584 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 LRMDAQ9H2I8 198 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 TPBGLP0DKB5 382 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 PTDSS1P48651 473 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 GEMIN4P57678 1058 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 NBPF12Q5TAG4 269 aaPredicted RBP11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 CLNKQ7Z7G1 428 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 RFX6Q8HWS3 928 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 ARFGAP1Q8N6T3 406 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 GRAMD1AQ96CP6 724 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 CFAP36Q96G28 342 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 CYTH4Q9UIA0 394 aa11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 XPO7Q9UIA9 1087 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-203ENST00000400556 ALOX15BO15296 676 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 TOP3BO95985 862 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 CALB2P22676 271 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 CXCL9Q07325 125 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 PTPN20Q4JDL3 420 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 TIPINQ9BVW5 301 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 PLA2G6O60733 806 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 ZC3H11AO75152 810 aaKnown RBP eCLIP11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 KRT36O76013 467 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 C1QBPQ07021 282 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 ACVR2BQ13705 512 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 MORF4L2Q15014 288 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 CCDC6Q16204 474 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 SERAC1Q96JX3 654 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 SLC13A1Q9BZW2 595 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 ZNRF3Q9ULT6 936 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 SYNPO2Q9UMS6 1093 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 COL4A5P29400 1685 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 E5RJQ4 531 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 STAM2O75886 525 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 DCTN3O75935 186 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 ELK3P41970 407 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 PSEN1P49768 467 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 LMNB2Q03252 620 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 FAAP100Q0VG06 881 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 BMPR2Q13873 1038 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 KBTBD12Q3ZCT8 623 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 FYB2Q5VWT5 728 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 C1orf228Q6PIY5 440 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 MAB21L3Q8N8X9 362 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 STK32AQ8WU08 396 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 SLC7A3Q8WY07 619 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 ASCC2Q9H1I8 757 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 PDLIM7Q9NR12 457 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 ACTL7BQ9Y614 415 aa11.09□□□□□ -0.63
PPP4R1-203ENST00000400556 CNTNAP2Q9UHC6 1331 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 FAM237BA0A1B0GVD1 139 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 EME2A4GXA9 379 aaPredicted RBP11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 PRPF4O43172 522 aaKnown RBP eCLIP11.08□□□□□ -0.641e-6■■■□□ 18.5
PPP4R1-203ENST00000400556 LRCH4O75427 683 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 ABHD2P08910 425 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 PYGBP11216 843 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 RCN2Q14257 317 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 KPNB1Q14974 876 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 PRPF39Q86UA1 669 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 ALYREFQ86V81 257 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 TMEM174Q8WUU8 243 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 CADM1Q9BY67 442 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 MANSC1Q9H8J5 431 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 GPATCH2LQ9NWQ4 482 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 CYP39A1Q9NYL5 469 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 HMGXB4Q9UGU5 601 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 SMG5Q9UPR3 1016 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 NR2E3Q9Y5X4 410 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 LPXNO60711 386 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 KRT3P12035 628 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 SLC8A3P57103 927 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 PSMC1P62191 440 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 TRPC3Q13507 836 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 CAPSQ13938 189 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 RCN1Q15293 331 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 ABHD15Q6UXT9 468 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 NETO2Q8NC67 525 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 TMEM35BQ8NCS4 154 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 FBXO27Q8NI29 283 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 UCMAQ8WVF2 138 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 TRAPPC12Q8WVT3 735 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 TTC25Q96NG3 672 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 CGRRF1Q99675 332 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 PPP1R12CQ9BZL4 782 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 ZNF302Q9NR11 478 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 SPDYE5A6NIY4 337 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 KBTBD13C9JR72 458 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 CYB561D2O14569 222 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 KIF1CO43896 1103 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 UGT1A9O60656 530 aa11.08□□□□□ -0.64
PPP4R1-203ENST00000400556 MT-ND3P03897 115 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms