RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-218	ENST00000399644	NEK9	Q8TD19	979 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	UNK	Q9C0B0	810 aa	Known RBP	11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PSD3	Q9NYI0	1048 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	GRXCR2	A6NFK2	248 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ZBTB39	O15060	712 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ARL4C	P56559	192 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SRSF11	Q05519	484 aa	Known RBP	11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MPP2	Q14168	576 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	GALNTL6	Q49A17	601 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TRIQK	Q629K1	86 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PHACTR4	Q8IZ21	702 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	WNK4	Q96J92	1243 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	NPHS2	Q9NP85	383 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ABI2	Q9NYB9	513 aa	Predicted RBP	11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	HPS5	Q9UPZ3	1129 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	AOX1	Q06278	1338 aa		11.57	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PRKCB	P05771	671 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	UMPS	P11172	480 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PDIA2	Q13087	525 aa	Known RBP	11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MTA1	Q13330	715 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ZNF211	Q13398	564 aa	Predicted RBP	11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CNOT10	Q9H9A5	744 aa	Known RBP	11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CHKB	Q9Y259	395 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MROH7-TTC4	A0A0A0MT08	1334 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TRIM24	O15164	1050 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	GPC1	P35052	558 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TWF1	Q12792	350 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PDZK1	Q5T2W1	519 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ATL2	Q8NHH9	583 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CELF1	Q92879	486 aa	Known RBP	11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SLC28A3	Q9HAS3	691 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PLA2G4C	Q9UP65	541 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CDH2	P19022	906 aa	Predicted RBP	11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	C21orf59	P57076	290 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PADI6	Q6TGC4	694 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MARK2	Q7KZI7	788 aa	Known RBP	11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SYTL1	Q8IYJ3	562 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	FAM136A	Q96C01	138 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MARK1	Q9P0L2	795 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	DAPK2	Q9UIK4	370 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TJP3	O95049	919 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TARS	P26639	723 aa	Known RBP	11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CDC27	P30260	824 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PRIM2	P49643	509 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CDC73	Q6P1J9	531 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	OSCP1	Q8WVF1	389 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	E2F7	Q96AV8	911 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CIPC	Q9C0C6	399 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	NRDE2	Q9H7Z3	1164 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PTPRH	Q9HD43	1115 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644		F5H6K3	240 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MAGOH	P61326	146 aa	Known RBP	11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KLRC3	Q07444	240 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	GPS1	Q13098	491 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PPM1L	Q5SGD2	360 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CRAMP1	Q96RY5	1269 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CCDC3	Q9BQI4	270 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SEPT3	Q9UH03	358 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PCDHB6	Q9Y5E3	794 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SPACA6	W5XKT8	324 aa		11.56	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PZP	P20742	1482 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TRIM64B	A6NI03	449 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	BHMT2	Q9H2M3	363 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	VIPAS39	Q9H9C1	493 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MAGEF1	Q9HAY2	307 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ETNK1	Q9HBU6	452 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	POLD4	Q9HCU8	107 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SMIM31	A0A1B0GVY4	71 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MAGEB2	O15479	319 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	FGG	P02679	453 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SDC4	P31431	198 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KRT20	P35900	424 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	EIF3E	P60228	445 aa	Known RBP	11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SGCG	Q13326	291 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ACSF2	Q96CM8	615 aa	Predicted RBP	11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	RCOR1	Q9UKL0	485 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PADI4	Q9UM07	663 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KHDRBS3	O75525	346 aa	Known RBP	11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	IL12RB1	P42701	662 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CACNA2D1	P54289	1103 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PDIA6	Q15084	440 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ZRANB3	Q5FWF4	1079 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	RABGAP1L	Q5R372	815 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ARMC3	Q5W041	872 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	LDHD	Q86WU2	507 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	RIN2	Q8WYP3	895 aa	Predicted RBP	11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	AK8	Q96MA6	479 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CCSER1	Q9C0I3	900 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MEI4	A8MW99	385 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PSMD12	O00232	456 aa	Predicted RBP	11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KPNA5	O15131	536 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ERN1	O75460	977 aa	Known RBP	11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PDE5A	O76074	875 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TYK2	P29597	1187 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CTNNB1	P35222	781 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ADD2	P35612	726 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	GGCX	P38435	758 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	QARS	P47897	775 aa	Known RBP	11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	STAR	P49675	285 aa		11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms