RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 SLC9A1P19634 815 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 MSH3P20585 1137 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 SLC16A1P53985 500 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 TRIM28Q13263 835 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 PCDHGA4Q9Y5G9 962 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 F8W810 466 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 TSPAN3O60637 253 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 FAM107AO95990 144 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 SP100P23497 879 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 FMO5P49326 533 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 GABPB1Q06547 395 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 PPIL2Q13356 520 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 RPRD1BQ9NQG5 326 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 MBD5Q9P267 1494 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 RNF17Q9BXT8 1623 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 MUTP22033 750 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 CREMQ03060 361 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 OCA2Q04671 838 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 ZC2HC1CQ53FD0 456 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 SARM1Q6SZW1 724 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 KIAA1324Q6UXG2 1013 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 CACUL1Q86Y37 369 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.56□□□□□ -0.42e-6■■■■■ 45.2
CACNA1C-213ENST00000399629 GOLPH3LQ9H4A5 285 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 PNMA8BQ9ULN7 279 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 RIMS1Q86UR5 1692 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 GOLGA8TH3BQL2 631 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 CBX4O00257 560 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 STRNO43815 780 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 PMPCBO75439 489 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 GEMIN4P57678 1058 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 ALFQ53S48 1182 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 FBXO33Q7Z6M2 555 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 ELAC2Q9BQ52 826 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 STK33Q9BYT3 514 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 GTF2A1LQ9UNN4 478 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 AURKCQ9UQB9 309 aa12.56□□□□□ -0.4
CACNA1C-213ENST00000399629 MEI4A8MW99 385 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 PRMT3O60678 531 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 SOAT2O75908 522 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 POLBP06746 335 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 CUL3Q13618 768 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 ZNF555Q8NEP9 628 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 CDCA5Q96FF9 252 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 RIC8BQ9NVN3 520 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 DCTN4Q9UJW0 460 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 FAM187AA6NFU0 413 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 PI4K2AQ9BTU6 479 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 GRID2IPA4D2P6 1211 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 NCK2O43639 380 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 MTA2O94776 668 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 CHADLQ6NUI6 762 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 ADGRE3Q9BY15 652 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 PXMP2Q9NR77 195 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 POLLQ9UGP5 575 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 TBX20Q9UMR3 447 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 GPR75-ASB3A0A0A6YYF3 556 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 PDZK1P1A8MUH7 402 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 CABYRO75952 493 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 HOXC6P09630 235 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 PSEN2P49810 448 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 CXCL9Q07325 125 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 INPP5AQ14642 412 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 LY6KQ17RY6 165 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 SEZ6Q53EL9 994 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 ACOT1Q86TX2 421 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 ANKRD49Q8WVL7 239 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 CHAMP1Q96JM3 812 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 ZC3H7BQ9UGR2 993 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 RNF112Q9ULX5 631 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 TDRKHQ9Y2W6 561 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 E2F8A0AVK6 867 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 CYTH3O43739 400 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 TLL1O43897 1013 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 POLR2EP19388 210 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 PTPN3P26045 913 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 ARFIP2P53365 341 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 SYDE1Q6ZW31 735 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 BBS7Q8IWZ6 715 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 KIRREL3Q8IZU9 778 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 FIBCD1Q8N539 461 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 TRPV2Q9Y5S1 764 aa12.55□□□□□ -0.4
CACNA1C-213ENST00000399629 VPS26AO75436 327 aa12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 ITGALP20701 1170 aa12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 NAMPTP43490 491 aa12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 BEND6Q5SZJ8 279 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 TRMT11Q7Z4G4 463 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 CCDC60Q8IWA6 550 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 ATL2Q8NHH9 583 aa12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 WDR41Q9HAD4 459 aa12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 CCDC159P0C7I6 412 aa12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 HALP42357 657 aa12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 SLC26A2P50443 739 aa12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 DGKZQ13574 1117 aa12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 DDX39BQ13838 428 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 SMTNL2Q2TAL5 461 aa12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 C16orf62Q7Z3J2 963 aa12.54□□□□□ -0.4
CACNA1C-213ENST00000399629 MYO1HQ8N1T3 1032 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms