RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 BSNDQ8WZ55 320 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 RANBP17Q9H2T7 1088 aaKnown RBP14.67□□□□□ -0.06
APOB-202ENST00000399256 KMT5AQ9NQR1 393 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 SCINQ9Y6U3 715 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 ASTN2O75129 1339 aaPredicted RBP14.67□□□□□ -0.06
APOB-202ENST00000399256 E5RJQ4 531 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 LYNP07948 512 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 PRKD1Q15139 912 aaPredicted RBP14.67□□□□□ -0.06
APOB-202ENST00000399256 BRDTQ58F21 947 aaPredicted RBP14.67□□□□□ -0.06
APOB-202ENST00000399256 WDR44Q5JSH3 913 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 DRICH1Q6PGQ1 229 aaPredicted RBP14.67□□□□□ -0.06
APOB-202ENST00000399256 SERAC1Q96JX3 654 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 CYTH2Q99418 400 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 IDI2Q9BXS1 227 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 ACSS3Q9H6R3 686 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 PCDH9Q9HC56 1237 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.67□□□□□ -0.06
APOB-202ENST00000399256 hCG_1818297A0A087WSY0 165 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 TCRBV7S3A2A0A539 114 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 HNRNPDLO14979 420 aaKnown RBP14.66□□□□□ -0.06
APOB-202ENST00000399256 HLA-DRAP01903 254 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 GTF2H1P32780 548 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 BPIFB4P59827 614 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 DMP1Q13316 513 aaPredicted RBP14.66□□□□□ -0.06
APOB-202ENST00000399256 CUL3Q13618 768 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 KRT72Q14CN4 511 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 KLHL38Q2WGJ6 581 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 ABRAQ8N0Z2 381 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 GPD1LQ8N335 351 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 CPT1BQ92523 772 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 BICD1Q96G01 975 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 MCEEQ96PE7 176 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 TUBGCP5Q96RT8 1024 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 DHRS4Q9BTZ2 278 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 MMADHCQ9H3L0 296 aaPredicted RBP14.66□□□□□ -0.06
APOB-202ENST00000399256 FBXO28Q9NVF7 368 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 COL20A1Q9P218 1284 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 PDP2Q9P2J9 529 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 IP6K2Q9UHH9 426 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 DRG1Q9Y295 367 aaKnown RBP14.66□□□□□ -0.06
APOB-202ENST00000399256 FARP1Q9Y4F1 1045 aaPredicted RBP14.66□□□□□ -0.06
APOB-202ENST00000399256 LOXHD1Q8IVV2 1947 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 USP1O94782 785 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 BAG2O95816 211 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 GSTT1P30711 240 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 WNT7BP56706 349 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 PSMC5P62195 406 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 ZNF252P-AS1Q0IIN9 211 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 AOC3Q16853 763 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 SLC5A9Q2M3M2 681 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 USP37Q86T82 979 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 LDHDQ86WU2 507 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 TTC1Q99614 292 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 TDRD3Q9H7E2 651 aaKnown RBP14.66□□□□□ -0.06
APOB-202ENST00000399256 PARVAQ9NVD7 372 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 ANGPTL2Q9UKU9 493 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 NFASCO94856 1347 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 ZBTB7AO95365 584 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 ANPEPP15144 967 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 TNNI1P19237 187 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 FAM182AQ5T1J6 154 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 RASIP1Q5U651 963 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 TREML1Q86YW5 311 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 CCDC110Q8TBZ0 833 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 FBXL18Q96ME1 805 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 EPAS1Q99814 870 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 CHMP2BQ9UQN3 213 aa14.66□□□□□ -0.06
APOB-202ENST00000399256 A8MXQ7 604 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 ITGAVP06756 1048 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 PYGBP11216 843 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 KDSRQ06136 332 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 PDCD2Q16342 344 aaPredicted RBP14.65□□□□□ -0.06
APOB-202ENST00000399256 RIPOR1Q6ZS17 1223 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 PPIL6Q8IXY8 311 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 ARHGAP24Q8N264 748 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 SLC25A41Q8N5S1 370 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.65□□□□□ -0.06
APOB-202ENST00000399256 ALKBH8Q96BT7 664 aaKnown RBP14.65□□□□□ -0.06
APOB-202ENST00000399256 AGO4Q9HCK5 861 aaKnown RBP14.65□□□□□ -0.06
APOB-202ENST00000399256 ACO1P21399 889 aaKnown RBP14.65□□□□□ -0.06
APOB-202ENST00000399256 MCCD1P59942 119 aaPredicted RBP14.65□□□□□ -0.06
APOB-202ENST00000399256 OGDHQ02218 1023 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 PTK7Q13308 1070 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 TFDP3Q5H9I0 405 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 SYCP2LQ5T4T6 812 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 PHF13Q86YI8 300 aaPredicted RBP14.65□□□□□ -0.06
APOB-202ENST00000399256 RBM15BQ8NDT2 890 aaKnown RBP14.65□□□□□ -0.06
APOB-202ENST00000399256 PANX3Q96QZ0 392 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 CSRNP1Q96S65 589 aa14.65□□□□□ -0.06
APOB-202ENST00000399256 ZC3H11AO75152 810 aaKnown RBP eCLIP14.64□□□□□ -0.07
APOB-202ENST00000399256 TMEM63AO94886 807 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 ETV4P43268 484 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 FAAP100Q0VG06 881 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 TKFCQ3LXA3 575 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 TDRD10Q5VZ19 366 aaKnown RBP14.64□□□□□ -0.07
APOB-202ENST00000399256 NKD2Q969F2 451 aaPredicted RBP14.64□□□□□ -0.07
APOB-202ENST00000399256 AGBL1Q96MI9 1066 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 MECRQ9BV79 373 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 PHACTR1Q9C0D0 580 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 ASCC2Q9H1I8 757 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms