RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ABI2Q9NYB9 513 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 CDH22Q9UJ99 828 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 SLC27A5Q9Y2P5 690 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 YIPF1Q9Y548 306 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PCDHB4Q9Y5E5 795 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 DOCK6Q96HP0 2047 aa13.21□□□□□ -0.29
HLA-DQB1-203ENST00000399082 PATJQ8NI35 1801 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 NOTCH4Q99466 2003 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 F8VZ95 297 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 FOXN3O00409 490 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 C8AP07357 584 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HAPLN1P10915 354 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ATF6P18850 670 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CYP2F1P24903 491 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GPR15P49685 360 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 POLR2FP61218 127 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 YWHAEP62258 255 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SMARCB1Q12824 385 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 DRAP1Q14919 205 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 NFE2Q16621 373 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CFAP221Q4G0U5 840 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 FAM35AQ86V20 835 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 FAM71AQ8IYT1 594 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TTC39CQ8N584 583 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SPPL2BQ8TCT7 592 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HDAC7Q8WUI4 952 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 BAP1Q92560 729 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TNIP3Q96KP6 325 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ANP32EQ9BTT0 268 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 S1PR5Q9H228 398 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 PLEKHA4Q9H4M7 779 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 UBE2ZQ9H832 354 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CYP4F11Q9HBI6 524 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ABCB6Q9NP58 842 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 NLRC4Q9NPP4 1024 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 PCDHB5Q9Y5E4 795 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 INSL5Q9Y5Q6 135 aa13.2□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GREB1Q4ZG55 1949 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 XIRP2A4UGR9 3374 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 FSD2A1L4K1 749 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 O00370 1275 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 NCK2O43639 380 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 BEST1O76090 585 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 PAEPP09466 180 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 RFX1P22670 979 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 BDNFP23560 247 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HOXA9P31269 272 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CLCN1P35523 988 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CYP27A1Q02318 531 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 RAPGEF1Q13905 1077 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 MAPRE1Q15691 268 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 PPP1R26Q5T8A7 1209 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 E4F1Q66K89 784 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ARHGAP17Q68EM7 881 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 GPIHBP1Q8IV16 184 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 STKLD1Q8NE28 680 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ZMIZ2Q8NF64 920 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 NEK11Q8NG66 645 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SLC2A14Q8TDB8 520 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 C2orf15Q8WU43 125 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 FUBP3Q96I24 572 aaKnown RBP eCLIP13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 FAM81BQ96LP2 452 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HNRNPABQ99729 332 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 APOL5Q9BWW9 433 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 STK33Q9BYT3 514 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 DZANK1Q9NVP4 752 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CEP72Q9P209 647 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HSFX1Q9UBD0 423 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 MAFFQ9ULX9 164 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 DENND4AQ7Z401 1863 aa13.19□□□□□ -0.3
HLA-DQB1-203ENST00000399082 H3BQ06 376 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 NRG2O14511 850 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CYP26A1O43174 497 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CFHP08603 1231 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 KRT5P13647 590 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 BRD2P25440 801 aaKnown RBP13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 MAGEA11P43364 429 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TWF1Q12792 350 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CLUL1Q15846 466 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 DDR2Q16832 855 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 MGAT5BQ3V5L5 792 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 RARS2Q5T160 578 aaKnown RBP13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 LIN9Q5TKA1 542 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SDHAF4Q5VUM1 108 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TMC5Q6UXY8 1006 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 C4orf50Q6ZRC1 276 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 TTC30AQ86WT1 665 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SPATA2LQ8IUW3 424 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CMASQ8NFW8 434 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CYFIP2Q96F07 1278 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 PCMTD1Q96MG8 357 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 HEXIM2Q96MH2 286 aaKnown RBP13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SEPT5Q99719 369 aaPredicted RBP13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SMOQ99835 787 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 SFXN1Q9H9B4 322 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ZDHHC7Q9NXF8 308 aa13.18□□□□□ -0.3
HLA-DQB1-203ENST00000399082 ITIH6Q6UXX5 1313 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 CCDC195A0A1B0GUA6 201 aa13.17□□□□□ -0.3
HLA-DQB1-203ENST00000399082 PRRG1O14668 218 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms