RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 GGA2Q9UJY4 613 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 MTUS1Q9ULD2 1270 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 UBE4BO95155 1302 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 SPTLC1O15269 473 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 ASAP2O43150 1006 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 OR4Q2P0C623 313 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 LINGO3P0C6S8 592 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 SYN1P17600 705 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 GJA9P57773 515 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 MTA1Q13330 715 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 SMTNL2Q2TAL5 461 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 ATP13A4Q4VNC1 1196 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 SPATA21Q7Z572 469 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 MFN1Q8IWA4 741 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 ZC3H3Q8IXZ2 948 aaKnown RBP13.88□□□□□ -0.19
TOP3B-202ENST00000398793 DBF4BQ8NFT6 615 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 HVCN1Q96D96 273 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 PGLYRP2Q96PD5 576 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 NOX5Q96PH1 765 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 KATNAL1Q9BW62 490 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 B3GNT5Q9BYG0 378 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.88□□□□□ -0.193e-9■■■■■ 34.7
TOP3B-202ENST00000398793 SUDS3Q9H7L9 328 aaPredicted RBP13.88□□□□□ -0.19
TOP3B-202ENST00000398793 NUDT5Q9UKK9 219 aa13.88□□□□□ -0.19
TOP3B-202ENST00000398793 SMIM28A0A1B0GU29 152 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 A8MXQ7 604 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 SPOPO43791 374 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 ITGB1P05556 798 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 CHRNB2P17787 502 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 VPS41P49754 854 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 NDST1P52848 882 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 RTP1P59025 263 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 PEX26Q7Z412 305 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 FBXL18Q96ME1 805 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 LRRC1Q9BTT6 524 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 CNOT8Q9UFF9 292 aaKnown RBP13.87□□□□□ -0.19
TOP3B-202ENST00000398793 PCSK1NQ9UHG2 260 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 COG5Q9UP83 839 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 SCAMP3O14828 347 aaKnown RBP13.87□□□□□ -0.19
TOP3B-202ENST00000398793 CCL5P13501 91 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 CLCNKBP51801 687 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 FMO1Q01740 532 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 TAF5Q15542 800 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 SYCP2LQ5T4T6 812 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 CFAP58Q5T655 872 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 SDHAF4Q5VUM1 108 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 RSPH3Q86UC2 560 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 SLC17A8Q8NDX2 589 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 PAWRQ96IZ0 340 aaKnown RBP13.87□□□□□ -0.19
TOP3B-202ENST00000398793 ZSWIM1Q9BR11 485 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 WDR81Q562E7 1941 aa13.87□□□□□ -0.19
TOP3B-202ENST00000398793 A0A1W2PQJ5 194 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 ZSCAN5CA6NGD5 496 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-202ENST00000398793 M0QYV0 167 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 FAM189A1O60320 539 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 ZC3H11AO75152 810 aaKnown RBP eCLIP13.86□□□□□ -0.19
TOP3B-202ENST00000398793 FAM163BP0C2L3 166 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 EPHB4P54760 987 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 RPL7AP62424 266 aaKnown RBP13.86□□□□□ -0.19
TOP3B-202ENST00000398793 ATP11AP98196 1134 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 RAB6CQ53S08 254 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 KCNT1Q5JUK3 1230 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 NUP85Q9BW27 656 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 RAB6CQ9H0N0 254 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 PTPRHQ9HD43 1115 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 AIPL1Q9NZN9 384 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 ANAPC7Q9UJX3 599 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 RBBP6Q7Z6E9 1792 aaKnown RBP13.86□□□□□ -0.19
TOP3B-202ENST00000398793 TTC3P53804 2025 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 SMIM35A0A1B0GVV1 85 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 TLR3O15455 904 aaKnown RBP13.86□□□□□ -0.19
TOP3B-202ENST00000398793 NSFP46459 744 aaKnown RBP13.86□□□□□ -0.19
TOP3B-202ENST00000398793 OR1G1P47890 313 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 JAM2P57087 298 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 QPCTQ16769 361 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 SPOUT1Q5T280 376 aaKnown RBP13.86□□□□□ -0.19
TOP3B-202ENST00000398793 KCTD17Q8N5Z5 321 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 ZNF606Q8WXB4 792 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 MROH7Q68CQ1 1323 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 WDR87Q6ZQQ6 2873 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 SETSIPP0DME0 302 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 TCF4P15884 667 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 CTCFP49711 727 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-202ENST00000398793 DYNLT1P63172 113 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 SF3A3Q12874 501 aaKnown RBP eCLIP13.86□□□□□ -0.199e-7■■■■□ 23.9
TOP3B-202ENST00000398793 LHX8Q68G74 356 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 DENND1BQ6P3S1 775 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 SCYL2Q6P3W7 929 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 CCDC170Q8IYT3 715 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 CACNA2D3Q8IZS8 1091 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 KRT35Q92764 455 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 FAM105AQ9NUU6 356 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 NOP53Q9NZM5 478 aaKnown RBP13.86□□□□□ -0.19
TOP3B-202ENST00000398793 ADAM22Q9P0K1 906 aa13.86□□□□□ -0.19
TOP3B-202ENST00000398793 TRIOBPQ9H2D6 2365 aa13.85□□□□□ -0.19
TOP3B-202ENST00000398793 TRPM7Q96QT4 1865 aa13.85□□□□□ -0.19
TOP3B-202ENST00000398793 ITGA4P13612 1032 aa13.85□□□□□ -0.19
TOP3B-202ENST00000398793 LCP1P13796 627 aa13.85□□□□□ -0.19
TOP3B-202ENST00000398793 ROR2Q01974 943 aaKnown RBP13.85□□□□□ -0.19
TOP3B-202ENST00000398793 WSCD1Q658N2 575 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms