RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 NOP9Q86U38 636 aaKnown RBP15.82■□□□□ 0.12
CAPN3-207ENST00000397200 NT5DC3Q86UY8 548 aa15.82■□□□□ 0.12
CAPN3-207ENST00000397200 CLP1Q92989 425 aaKnown RBP15.82■□□□□ 0.12
CAPN3-207ENST00000397200 IGSF21Q96ID5 467 aa15.82■□□□□ 0.12
CAPN3-207ENST00000397200 TAS2R14Q9NYV8 317 aa15.82■□□□□ 0.12
CAPN3-207ENST00000397200 EHD2Q9NZN4 543 aa15.82■□□□□ 0.12
CAPN3-207ENST00000397200 RWDD3Q9Y3V2 267 aa15.82■□□□□ 0.12
CAPN3-207ENST00000397200 SF3B1O75533 1304 aaKnown RBP eCLIP15.82■□□□□ 0.12
CAPN3-207ENST00000397200 LINC01553A4QN01 128 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 M0QZQ0 153 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 MTA2O94776 668 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 MYOGP15173 224 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 CD58P19256 250 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 CDH8P55286 799 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 ELAVL2Q12926 359 aaKnown RBP15.81■□□□□ 0.12
CAPN3-207ENST00000397200 SOWAHAQ2M3V2 549 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 MAP9Q49MG5 647 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 CCDC70Q6NSX1 233 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 FUT10Q6P4F1 479 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 CHRDL2Q6WN34 429 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 HDXQ7Z353 690 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 TMEM173Q86WV6 379 aaPredicted RBP15.81■□□□□ 0.12
CAPN3-207ENST00000397200 RHOT2Q8IXI1 618 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 SLC39A11Q8N1S5 342 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 TTC39CQ8N584 583 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 ACTRT1Q8TDG2 376 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 BCL7CQ8WUZ0 217 aaPredicted RBP15.81■□□□□ 0.12
CAPN3-207ENST00000397200 ARHGEF26Q96DR7 871 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 TMEM169Q96HH4 297 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 HES6Q96HZ4 224 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 MS4A14Q96JA4 679 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 SDCBP2Q9H190 292 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 FAM124BQ9H5Z6 455 aaPredicted RBP15.81■□□□□ 0.12
CAPN3-207ENST00000397200 CISHQ9NSE2 258 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 SMARCAL1Q9NZC9 954 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 SPG21Q9NZD8 308 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 PACSIN2Q9UNF0 486 aaPredicted RBP15.81■□□□□ 0.12
CAPN3-207ENST00000397200 TSC2P49815 1807 aa15.81■□□□□ 0.12
CAPN3-207ENST00000397200 RTN2O75298 545 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 LINC00271P0C7V0 271 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 FMO1Q01740 532 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 SMYD5Q6GMV2 418 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 LIMS2Q7Z4I7 341 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 ADGRF2Q8IZF7 708 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 TMEM86AQ8N2M4 240 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 RASGEF1CQ8N431 466 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 SLC35G2Q8TBE7 412 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 UBE2Q2Q8WVN8 375 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 DDX1Q92499 740 aaKnown RBP15.8■□□□□ 0.12
CAPN3-207ENST00000397200 MRPL45Q9BRJ2 306 aaKnown RBP15.8■□□□□ 0.12
CAPN3-207ENST00000397200 RBM12Q9NTZ6 932 aaKnown RBP15.8■□□□□ 0.12
CAPN3-207ENST00000397200 DSEQ9UL01 958 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 PCDHB8Q9UN66 801 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 PCDHB4Q9Y5E5 795 aa15.8■□□□□ 0.12
CAPN3-207ENST00000397200 BUB1BO60566 1050 aaPredicted RBP15.79■□□□□ 0.12
CAPN3-207ENST00000397200 CA3P07451 260 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 FAM163BP0C2L3 166 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 KRT5P13647 590 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 ACO1P21399 889 aaKnown RBP15.79■□□□□ 0.12
CAPN3-207ENST00000397200 CTNNB1P35222 781 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 USP8P40818 1118 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 CDR2Q01850 454 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 RAB30Q15771 203 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 FAM171A1Q5VUB5 890 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 WSCD1Q658N2 575 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 C11orf63Q6NUN7 778 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 CCNI2Q6ZMN8 369 aaPredicted RBP15.79■□□□□ 0.12
CAPN3-207ENST00000397200 PEX26Q7Z412 305 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 METTL23Q86XA0 190 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 UBR7Q8N806 425 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 PCDHB18PQ96TA0 734 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 LRRC1Q9BTT6 524 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 GPR62Q9BZJ7 368 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 THAP2Q9H0W7 228 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 SNX25Q9H3E2 840 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 OSGEPQ9NPF4 335 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 MSRAQ9UJ68 235 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 TIMM13Q9Y5L4 95 aaPredicted RBP15.79■□□□□ 0.12
CAPN3-207ENST00000397200 VWA8A3KMH1 1905 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 SYN3O14994 580 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 CYP26A1O43174 497 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 CYP11A1P05108 521 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 CYP11B1P15538 503 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 TYMPP19971 482 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 WARSP23381 471 aaKnown RBP15.79■□□□□ 0.12
CAPN3-207ENST00000397200 BMPR1AP36894 532 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 GABPB1Q06547 395 aaPredicted RBP15.79■□□□□ 0.12
CAPN3-207ENST00000397200 INCA1Q0VD86 236 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 TMEM270Q6UE05 265 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 SLC47A2Q86VL8 602 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 OR6B3Q8NGW1 331 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 SPATA18Q8TC71 538 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 KBTBD7Q8WVZ9 684 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 PBX4Q9BYU1 374 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 GOLPH3Q9H4A6 298 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 VIPAS39Q9H9C1 493 aa15.79■□□□□ 0.12
CAPN3-207ENST00000397200 TTC7AQ9ULT0 858 aaPredicted RBP15.79■□□□□ 0.12
CAPN3-207ENST00000397200 BARX2Q9UMQ3 279 aaPredicted RBP15.79■□□□□ 0.12
CAPN3-207ENST00000397200 YBX2Q9Y2T7 364 aaKnown RBP15.79■□□□□ 0.12
CAPN3-207ENST00000397200 TMCO5BA8MYB1 307 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms