RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NRLP54845 237 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 KRT72Q14CN4 511 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 SMTNL2Q2TAL5 461 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 ZBTB41Q5SVQ8 909 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 MASTLQ96GX5 879 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 SSU72Q9NP77 194 aaKnown RBP25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 PCDHB2Q9Y5E7 798 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 F8VP50 259 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 DSG1Q02413 1049 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 USP4Q13107 963 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 LIN52Q52LA3 116 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 TDRD10Q5VZ19 366 aaKnown RBP25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 SDCCAG8Q86SQ7 713 aaPredicted RBP25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 GPD1LQ8N335 351 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 FNBP1Q96RU3 617 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 ZNF536O15090 1300 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 ALOX15BO15296 676 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 LIASO43766 372 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 MAPTP10636 758 aaKnown RBP25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 PYGBP11216 843 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 ANPEPP15144 967 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 CHRNA5P30532 468 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 GEMIN4P57678 1058 aaKnown RBP25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 NLRP11P59045 1033 aaKnown RBP25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 BRDTQ58F21 947 aaPredicted RBP25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 ARHGAP24Q8N264 748 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 VPS11Q9H270 941 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 ARMCX1Q9P291 453 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 G3BP2Q9UN86 482 aaKnown RBP25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 SLC4A7Q9Y6M7 1214 aa25.16■■□□□ 1.62
CSNK1E-203ENST00000396832 TFDP1Q14186 410 aa25.15■■□□□ 1.62
CSNK1E-203ENST00000396832 CCDC142Q17RM4 750 aa25.15■■□□□ 1.62
CSNK1E-203ENST00000396832 WDR44Q5JSH3 913 aa25.15■■□□□ 1.62
CSNK1E-203ENST00000396832 MCEEQ96PE7 176 aa25.15■■□□□ 1.62
CSNK1E-203ENST00000396832 ZWILCHQ9H900 591 aa25.15■■□□□ 1.62
CSNK1E-203ENST00000396832 ONECUT3O60422 494 aaPredicted RBP25.15■■□□□ 1.62
CSNK1E-203ENST00000396832 ZBTB45Q96K62 511 aaPredicted RBP25.15■■□□□ 1.62
CSNK1E-203ENST00000396832 ECSITQ9BQ95 431 aa25.15■■□□□ 1.62
CSNK1E-203ENST00000396832 ZNF341Q9BYN7 854 aa25.15■■□□□ 1.62
CSNK1E-203ENST00000396832 APOBEC3GQ9HC16 384 aaKnown RBP25.15■■□□□ 1.62
CSNK1E-203ENST00000396832 ZBTB12Q9Y330 459 aaPredicted RBP25.15■■□□□ 1.62
CSNK1E-203ENST00000396832 PDLIM1O00151 329 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 ETS2P15036 469 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 RAP1GDS1P52306 607 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 PSMC5P62195 406 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 RPS6P62753 249 aaKnown RBP25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 RASA2Q15283 850 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 LIN9Q5TKA1 542 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 NLRX1Q86UT6 975 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 MFSD14AQ96MC6 490 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 IWS1Q96ST2 819 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 CENPKQ9BS16 269 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 TMOD2Q9NZR1 351 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 GABBR1Q9UBS5 961 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 SH3BP1Q9Y3L3 701 aa25.14■■□□□ 1.62
CSNK1E-203ENST00000396832 THSD7AQ9UPZ6 1657 aa25.14■■□□□ 1.61
CSNK1E-203ENST00000396832 B2RBV5 119 aa25.14■■□□□ 1.61
CSNK1E-203ENST00000396832 CAP2P40123 477 aa25.14■■□□□ 1.61
CSNK1E-203ENST00000396832 NOMO3P69849 1222 aa25.14■■□□□ 1.61
CSNK1E-203ENST00000396832 GCNT1Q02742 428 aa25.14■■□□□ 1.61
CSNK1E-203ENST00000396832 PTP4A2Q12974 167 aa25.14■■□□□ 1.61
CSNK1E-203ENST00000396832 PABPC1LQ4VXU2 614 aaKnown RBP25.14■■□□□ 1.61
CSNK1E-203ENST00000396832 PPCSQ9HAB8 311 aa25.14■■□□□ 1.61
CSNK1E-203ENST00000396832 AVENQ9NQS1 362 aaPredicted RBP25.14■■□□□ 1.61
CSNK1E-203ENST00000396832 LOXHD1Q8IVV2 1947 aa25.14■■□□□ 1.61
CSNK1E-203ENST00000396832 FCHO1O14526 889 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 PSTPIP1O43586 416 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 ENTPD3O75355 529 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 RAD17O75943 681 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 DLDP09622 509 aaKnown RBP25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 CDK7P50613 346 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 HSD17B4P51659 736 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 GPX6P59796 221 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 EFHC2Q5JST6 749 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 ANKRD22Q5VYY1 191 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 CENPUQ71F23 418 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 CLEC4DQ8WXI8 215 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 FAM81BQ96LP2 452 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 ATXN10Q9UBB4 475 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 BAG2O95816 211 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 CCDC110Q8TBZ0 833 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 TTC1Q99614 292 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 RABGEF1Q9UJ41 708 aa25.13■■□□□ 1.61
CSNK1E-203ENST00000396832 F8W8V4 182 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 TM9SF1O15321 606 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 GDF10P55107 478 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 ARL4CP56559 192 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 MSS51Q4VC12 460 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 KCNT1Q5JUK3 1230 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 KATNAL2Q8IYT4 538 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 SYTL5Q8TDW5 730 aaPredicted RBP25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 OXNAD1Q96HP4 312 aaPredicted RBP25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 SLITRK1Q96PX8 696 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 ARHGEF4Q9NR80 690 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 CHCHD3Q9NX63 227 aaKnown RBP25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 SEPT9Q9UHD8 586 aaPredicted RBP25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 PHF24Q9UPV7 400 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 YDJCA8MPS7 323 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 ATP2A1O14983 1001 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms