RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 KIAA1958Q8N8K9 716 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 MAB21L3Q8N8X9 362 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 CCDC26Q8TAB7 109 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 DDX1Q92499 740 aaKnown RBP17.5■□□□□ 0.39
CLTA-203ENST00000396603 HPS4Q9NQG7 708 aa17.5■□□□□ 0.39
CLTA-203ENST00000396603 DDX43Q9NXZ2 648 aaKnown RBP17.5■□□□□ 0.39
CLTA-203ENST00000396603 TCF3P15923 654 aa17.49■□□□□ 0.39
CLTA-203ENST00000396603 STAT6P42226 847 aa17.49■□□□□ 0.39
CLTA-203ENST00000396603 MAGEA11P43364 429 aa17.49■□□□□ 0.39
CLTA-203ENST00000396603 MYO1EQ12965 1108 aa17.49■□□□□ 0.39
CLTA-203ENST00000396603 PKP1Q13835 747 aa17.49■□□□□ 0.39
CLTA-203ENST00000396603 MAPRE1Q15691 268 aaKnown RBP17.49■□□□□ 0.39
CLTA-203ENST00000396603 PRR23CQ6ZRP0 262 aa17.49■□□□□ 0.39
CLTA-203ENST00000396603 LIMS2Q7Z4I7 341 aa17.49■□□□□ 0.39
CLTA-203ENST00000396603 GPD1LQ8N335 351 aa17.49■□□□□ 0.39
CLTA-203ENST00000396603 FSIP1Q8NA03 581 aa17.49■□□□□ 0.39
CLTA-203ENST00000396603 TMLHEQ9NVH6 421 aa17.49■□□□□ 0.39
CLTA-203ENST00000396603 CIZ1Q9ULV3 898 aaPredicted RBP17.49■□□□□ 0.39
CLTA-203ENST00000396603 R3HCC1Q9Y3T6 440 aaKnown RBP17.49■□□□□ 0.39
CLTA-203ENST00000396603 SPTLC2O15270 562 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 PPP6R2O75170 966 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 TMEM191BP0C7N4 346 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 IDEP14735 1019 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 LIMK1P53667 647 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 KRT85P78386 507 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 DMWDQ09019 674 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 VSTM1Q6UX27 236 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 C4orf50Q6ZRC1 276 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 CEP68Q76N32 757 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 CCDC65Q8IXS2 484 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 ADGRF2Q8IZF7 708 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 CPA6Q8N4T0 437 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 CSGALNACT2Q8N6G5 542 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 LINC00301Q8NCQ3 95 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 TTC8Q8TAM2 541 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 GAB3Q8WWW8 586 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 SAAL1Q96ER3 474 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 ANKRD36BP1Q96IX9 119 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 PI4K2AQ9BTU6 479 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 TNMDQ9H2S6 317 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 IKZF4Q9H2S9 585 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 CUEDC2Q9H467 287 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 KIAA1586Q9HCI6 787 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 PANK4Q9NVE7 773 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 EHD2Q9NZN4 543 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 CCL26Q9Y258 94 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 NCOR2Q9Y618 2525 aa17.48■□□□□ 0.39
CLTA-203ENST00000396603 TCHHQ07283 1943 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 TADA3O75528 432 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 FAM163BP0C2L3 166 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 USP17L7P0C7H9 530 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 CASP5P51878 434 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 WNT7BP56706 349 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 USP4Q13107 963 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 MTF1Q14872 753 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 LPAL2Q16609 132 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 TXNDC8Q6A555 127 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 FSTL4Q6MZW2 842 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 FAM171BQ6P995 826 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 CACNA2D4Q7Z3S7 1137 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 SPATA2LQ8IUW3 424 aaPredicted RBP17.47■□□□□ 0.39
CLTA-203ENST00000396603 GPIHBP1Q8IV16 184 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 FAM160A2Q8N612 972 aaPredicted RBP17.47■□□□□ 0.39
CLTA-203ENST00000396603 OSCP1Q8WVF1 389 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 ATP2A3Q93084 1043 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 CHFRQ96EP1 664 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 SPATA17Q96L03 361 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 CLIC6Q96NY7 704 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 CBWD1Q9BRT8 395 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 SMG9Q9H0W8 520 aaKnown RBP17.47■□□□□ 0.39
CLTA-203ENST00000396603 EBF3Q9H4W6 596 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 INTS13Q9NVM9 706 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 SIX4Q9UIU6 781 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 PCDHGA5Q9Y5G8 931 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 SNX9Q9Y5X1 595 aa17.47■□□□□ 0.39
CLTA-203ENST00000396603 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.47■□□□□ 0.39
CLTA-203ENST00000396603 TRAV19A0A0A6YYK7 116 aa17.46■□□□□ 0.39
CLTA-203ENST00000396603 ZNF233A6NK53 670 aa17.46■□□□□ 0.39
CLTA-203ENST00000396603 EIF3DO15371 548 aaKnown RBP eCLIP17.46■□□□□ 0.39
CLTA-203ENST00000396603 ADRB1P08588 477 aa17.46■□□□□ 0.39
CLTA-203ENST00000396603 CYP2F1P24903 491 aa17.46■□□□□ 0.39
CLTA-203ENST00000396603 SNRPFP62306 86 aaKnown RBP17.46■□□□□ 0.39
CLTA-203ENST00000396603 ZNF77Q15935 545 aa17.46■□□□□ 0.39
CLTA-203ENST00000396603 FOXD4L6Q3SYB3 417 aaPredicted RBP17.46■□□□□ 0.39
CLTA-203ENST00000396603 FOXD4L3Q6VB84 417 aaPredicted RBP17.46■□□□□ 0.39
CLTA-203ENST00000396603 ZC3H10Q96K80 434 aaKnown RBP17.46■□□□□ 0.39
CLTA-203ENST00000396603 MTMR12Q9C0I1 747 aa17.46■□□□□ 0.39
CLTA-203ENST00000396603 C2orf42Q9NWW7 574 aa17.46■□□□□ 0.39
CLTA-203ENST00000396603 TBC1D7Q9P0N9 293 aa17.46■□□□□ 0.39
CLTA-203ENST00000396603 TFIP11Q9UBB9 837 aaKnown RBP17.46■□□□□ 0.39
CLTA-203ENST00000396603 GTF3C4Q9UKN8 822 aa17.46■□□□□ 0.39
CLTA-203ENST00000396603 CDH9Q9ULB4 789 aa17.46■□□□□ 0.39
CLTA-203ENST00000396603 MAGED2Q9UNF1 606 aaPredicted RBP17.46■□□□□ 0.39
CLTA-203ENST00000396603 SLC8A2Q9UPR5 921 aa17.46■□□□□ 0.39
CLTA-203ENST00000396603 DENND4CQ5VZ89 1909 aa17.45■□□□□ 0.38
CLTA-203ENST00000396603 RPP40O75818 363 aaKnown RBP17.45■□□□□ 0.38
CLTA-203ENST00000396603 TNNC2P02585 160 aa17.45■□□□□ 0.38
CLTA-203ENST00000396603 KRT19P08727 400 aa17.45■□□□□ 0.38
CLTA-203ENST00000396603 GJA4P35212 333 aa17.45■□□□□ 0.38
CLTA-203ENST00000396603 RAP1GAPP47736 663 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms