RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 PSMC1P62191 440 aaKnown RBP12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 RPL7AP62424 266 aaKnown RBP12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 BRD3Q15059 726 aa12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 GOLGA7BQ2TAP0 167 aa12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 WSCD1Q658N2 575 aa12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 LLGL2Q6P1M3 1020 aa12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 ARCQ7LC44 396 aa12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 C3orf58Q8NDZ4 430 aa12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 UBA3Q8TBC4 463 aa12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 IPO4Q8TEX9 1081 aaKnown RBP12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 KRT35Q92764 455 aa12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 HSFY1Q96LI6 401 aa12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 DPEP3Q9H4B8 488 aa12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 DSEQ9UL01 958 aa12.56□□□□□ -0.4
GTF2A2-202ENST00000396060 TTC3P53804 2025 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 TMEM110-MUSTN1A8MSY1 372 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 DCDC2CA8MYV0 355 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 POMCP01189 267 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 PDGFRBP09619 1106 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 PTPN1P18031 435 aaKnown RBP12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 TYMPP19971 482 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 MCM3P25205 808 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 BCAT1P54687 386 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 C1QTNF8P60827 252 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 PLCB3Q01970 1234 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 FAAP100Q0VG06 881 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 BST2Q10589 180 aaKnown RBP12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 TIGD5Q53EQ6 642 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 NOMO2Q5JPE7 1267 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 CLLU1OSQ5K130 101 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 CCDC70Q6NSX1 233 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 DCUN1D2Q6PH85 259 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 RHOT1Q8IXI2 618 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 KATNAL2Q8IYT4 538 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 B3GALNT2Q8NCR0 500 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 DBF4BQ8NFT6 615 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 HNRNPLLQ8WVV9 542 aaKnown RBP12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 SUSD3Q96L08 255 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 RNPC3Q96LT9 517 aaKnown RBP12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 PLVAPQ9BX97 442 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 UBXN6Q9BZV1 441 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 RBM12Q9NTZ6 932 aaKnown RBP12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 EHD2Q9NZN4 543 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 CDH9Q9ULB4 789 aa12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 TDRD15B5MCY1 1934 aaKnown RBP12.55□□□□□ -0.4
GTF2A2-202ENST00000396060 CENPFP49454 3210 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 FAM170AA1A519 330 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 CCDC151A5D8V7 595 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 ODC1P11926 461 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 IGFBP6P24592 240 aaPredicted RBP12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 RFC1P35251 1148 aaPredicted RBP12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 ACADSBP45954 432 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 PLA2G4AP47712 749 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 MARCKSL1P49006 195 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 DNA2P51530 1060 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 PDE4CQ08493 712 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 C2orf54Q08AI8 447 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 ZNF252P-AS1Q0IIN9 211 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 CYP4A22Q5TCH4 519 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 PMF1Q6P1K2 205 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 DSTYKQ6XUX3 929 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 PHLDB2Q86SQ0 1253 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 RNF169Q8NCN4 708 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 URGCPQ8TCY9 931 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 ACBD6Q9BR61 282 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 DUSP16Q9BY84 665 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 ARGLU1Q9NWB6 273 aaPredicted RBP12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 SMARCAL1Q9NZC9 954 aa12.54□□□□□ -0.4
GTF2A2-202ENST00000396060 CASTOR2A6NHX0 329 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 FSCN2O14926 492 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 XPO1O14980 1071 aaKnown RBP12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 HOXA2O43364 376 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 PQBP1O60828 265 aaKnown RBP12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 GABBR2O75899 941 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 B3GAT3O94766 335 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 FGGP02679 453 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 HSPA8P11142 646 aaKnown RBP12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 PYGMP11217 842 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 PCSK1P29120 753 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 GJA8P48165 433 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 OGDHQ02218 1023 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 TLE2Q04725 743 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 PTPROQ16827 1216 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 FAM171BQ6P995 826 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 FBXO38Q6PIJ6 1188 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 PAQR9Q6ZVX9 377 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 POLNQ7Z5Q5 900 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 MTERF4Q7Z6M4 381 aaKnown RBP12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 CPNE8Q86YQ8 564 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 COLGALT2Q8IYK4 626 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 FUKQ8N0W3 1084 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 EXD1Q8NHP7 514 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 KCTD13Q8WZ19 329 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 MCEEQ96PE7 176 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 NCAPGQ9BPX3 1015 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 PAAF1Q9BRP4 392 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms