RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 CHP1Q99653 195 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 C11orf84Q9BUA3 381 aaPredicted RBP9.36□□□□□ -0.91
CCR9-203ENST00000395963 TRIM62Q9BVG3 475 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 EHD2Q9NZN4 543 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 ADGRG1Q9Y653 693 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 TMEM265A0A087WTH1 108 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 SOWAHDA6NJG2 315 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 SART1O43290 800 aaKnown RBP9.36□□□□□ -0.91
CCR9-203ENST00000395963 KRT86O43790 486 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 B4GALT3O60512 393 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 URODP06132 367 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 H2AFZP0C0S5 128 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 BMPR1AP36894 532 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 GLUD2P49448 558 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 NOMO3P69849 1222 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 BST2Q10589 180 aaKnown RBP9.36□□□□□ -0.91
CCR9-203ENST00000395963 PKDCCQ504Y2 493 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 VARS2Q5ST30 1063 aaKnown RBP9.36□□□□□ -0.91
CCR9-203ENST00000395963 RAD9BQ6WBX8 426 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 H2AFVQ71UI9 128 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 RHOT2Q8IXI1 618 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 C1orf131Q8NDD1 294 aaKnown RBP9.36□□□□□ -0.91
CCR9-203ENST00000395963 KCTD13Q8WZ19 329 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 SMARCD1Q96GM5 515 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 C16orf45Q96MC5 204 aaPredicted RBP9.36□□□□□ -0.91
CCR9-203ENST00000395963 HEXIM2Q96MH2 286 aaKnown RBP9.36□□□□□ -0.91
CCR9-203ENST00000395963 PAAF1Q9BRP4 392 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 UBE2OQ9C0C9 1292 aaKnown RBP9.36□□□□□ -0.91
CCR9-203ENST00000395963 RXFP1Q9HBX9 757 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 PRG3Q9Y2Y8 225 aaPredicted RBP9.36□□□□□ -0.91
CCR9-203ENST00000395963 SCINQ9Y6U3 715 aa9.36□□□□□ -0.91
CCR9-203ENST00000395963 DDX3XO00571 662 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCR9-203ENST00000395963 XPO1O14980 1071 aaKnown RBP9.35□□□□□ -0.91
CCR9-203ENST00000395963 MTA2O94776 668 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 LINC00271P0C7V0 271 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 CD19P15391 556 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 CHRNB2P17787 502 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 MAGEA1P43355 309 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 NSFP46459 744 aaKnown RBP9.35□□□□□ -0.91
CCR9-203ENST00000395963 BRCC3P46736 316 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 PLA2G4AP47712 749 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 RAP1GAPP47736 663 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 GABRB2P47870 512 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 GATMP50440 423 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 CDH8P55286 799 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 GPR17Q13304 367 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 PAN2Q504Q3 1202 aaKnown RBP9.35□□□□□ -0.91
CCR9-203ENST00000395963 FAM171A1Q5VUB5 890 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 ARCQ7LC44 396 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 OSTM1Q86WC4 334 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 OLIG1Q8TAK6 271 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 LNX1Q8TBB1 728 aaPredicted RBP9.35□□□□□ -0.91
CCR9-203ENST00000395963 CYFIP2Q96F07 1278 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 FAM84AQ96KN4 292 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 NCAPGQ9BPX3 1015 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 CSNK1G1Q9HCP0 422 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 NGRNQ9NPE2 291 aaKnown RBP9.35□□□□□ -0.91
CCR9-203ENST00000395963 CXXC1Q9P0U4 656 aaPredicted RBP9.35□□□□□ -0.91
CCR9-203ENST00000395963 UVRAGQ9P2Y5 699 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 ADAMTS1Q9UHI8 967 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 GTF3C4Q9UKN8 822 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 NCANO14594 1321 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 A0A087X0T9 212 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 TRIM66O15016 1216 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 FAM228BP0C875 321 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 CTSAP10619 480 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 ERVK-21P61565 698 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 SMAD3P84022 425 aaKnown RBP9.35□□□□□ -0.91
CCR9-203ENST00000395963 ARID5AQ03989 594 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 KIF5AQ12840 1032 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 CCDC122Q5T0U0 273 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 LIN9Q5TKA1 542 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 ELMSAN1Q6PJG2 1045 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 HDAC7Q8WUI4 952 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 CTNNBL1Q8WYA6 563 aaPredicted RBP9.35□□□□□ -0.91
CCR9-203ENST00000395963 TWNKQ96RR1 684 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCR9-203ENST00000395963 ZBP1Q9H171 429 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 MRPL47Q9HD33 250 aaKnown RBP9.35□□□□□ -0.91
CCR9-203ENST00000395963 ASNSD1Q9NWL6 643 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 DPP7Q9UHL4 492 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 RSPH14Q9UHP6 348 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 MSRAQ9UJ68 235 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 PPP2R2CQ9Y2T4 447 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 PCDHA13Q9Y5I0 950 aa9.35□□□□□ -0.91
CCR9-203ENST00000395963 NLRC5Q86WI3 1866 aa9.34□□□□□ -0.91
CCR9-203ENST00000395963 PCNTO95613 3336 aa9.34□□□□□ -0.91
CCR9-203ENST00000395963 FBXO21O94952 628 aa9.34□□□□□ -0.91
CCR9-203ENST00000395963 ERBB2P04626 1255 aa9.34□□□□□ -0.91
CCR9-203ENST00000395963 MMEP08473 750 aa9.34□□□□□ -0.91
CCR9-203ENST00000395963 FAM200BP0CF97 657 aa9.34□□□□□ -0.91
CCR9-203ENST00000395963 TKTP29401 623 aaKnown RBP9.34□□□□□ -0.91
CCR9-203ENST00000395963 CTXN3Q4LDR2 81 aa9.34□□□□□ -0.91
CCR9-203ENST00000395963 KIAA1328Q86T90 577 aa9.34□□□□□ -0.91
CCR9-203ENST00000395963 GLYCTKQ8IVS8 523 aa9.34□□□□□ -0.91
CCR9-203ENST00000395963 TGS1Q96RS0 853 aaKnown RBP9.34□□□□□ -0.91
CCR9-203ENST00000395963 MYCBPQ99417 103 aaPredicted RBP9.34□□□□□ -0.91
CCR9-203ENST00000395963 RTP3Q9BQQ7 232 aa9.34□□□□□ -0.91
CCR9-203ENST00000395963 DUSP16Q9BY84 665 aa9.34□□□□□ -0.91
CCR9-203ENST00000395963 TSPAN16Q9UKR8 245 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms