RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 RNFT2Q96EX2 444 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 OSBPL6Q9BZF3 934 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 DAPK2Q9UIK4 370 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 DUOX2Q9NRD8 1548 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 FAM187AA6NFU0 413 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 RAP1GAPP47736 663 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 GSTA3Q16772 222 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 QRICH1Q2TAL8 776 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 ARMCX4Q5H9R4 360 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 LRRC8DQ7L1W4 858 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 AGPAT5Q9NUQ2 364 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 MPP6Q9NZW5 540 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 PRKAB1Q9Y478 270 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 TOP2BQ02880 1626 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 hCG_1984214I3L0E3 225 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 BBOX1O75936 387 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 HLA-DQA2P01906 255 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 GTF2E2P29084 291 aaKnown RBP12.71□□□□□ -0.37
SIN3A-202ENST00000394947 TPP2P29144 1249 aaPredicted RBP12.71□□□□□ -0.37
SIN3A-202ENST00000394947 GTF2H1P32780 548 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 ALDH1A3P47895 512 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 NCOA4Q13772 614 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 KYNUQ16719 465 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 MIIPQ5JXC2 388 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 TRPM8Q7Z2W7 1104 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 ZNF713Q8N859 430 aaPredicted RBP12.71□□□□□ -0.37
SIN3A-202ENST00000394947 ZNF560Q96MR9 790 aa12.71□□□□□ -0.37
SIN3A-202ENST00000394947 KBTBD13C9JR72 458 aa12.71□□□□□ -0.38
SIN3A-202ENST00000394947 FAM20BO75063 409 aa12.71□□□□□ -0.38
SIN3A-202ENST00000394947 LTFP02788 710 aa12.71□□□□□ -0.38
SIN3A-202ENST00000394947 HARS2P49590 506 aaKnown RBP12.71□□□□□ -0.38
SIN3A-202ENST00000394947 CSTF3Q12996 717 aaKnown RBP12.71□□□□□ -0.38
SIN3A-202ENST00000394947 DNAL1Q4LDG9 190 aa12.71□□□□□ -0.38
SIN3A-202ENST00000394947 CACTIN-AS1Q8N1I8 211 aa12.71□□□□□ -0.38
SIN3A-202ENST00000394947 RTL3Q8N8U3 475 aaKnown RBP12.71□□□□□ -0.38
SIN3A-202ENST00000394947 RFFLQ8WZ73 363 aa12.71□□□□□ -0.38
SIN3A-202ENST00000394947 IARS2Q9NSE4 1012 aaKnown RBP12.71□□□□□ -0.38
SIN3A-202ENST00000394947 IL1RAPL1Q9NZN1 696 aa12.71□□□□□ -0.38
SIN3A-202ENST00000394947 TRMT6Q9UJA5 497 aaKnown RBP12.71□□□□□ -0.38
SIN3A-202ENST00000394947 PSMA4P25789 261 aaKnown RBP12.71□□□□□ -0.38
SIN3A-202ENST00000394947 RGS4P49798 205 aa12.71□□□□□ -0.38
SIN3A-202ENST00000394947 JPH1Q9HDC5 661 aaPredicted RBP12.71□□□□□ -0.38
SIN3A-202ENST00000394947 RBM12Q9NTZ6 932 aaKnown RBP12.71□□□□□ -0.38
SIN3A-202ENST00000394947 GALNT8Q9NY28 637 aa12.71□□□□□ -0.38
SIN3A-202ENST00000394947 TP73O15350 636 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 RAD51CO43502 376 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 CSDE1O75534 798 aaKnown RBP12.7□□□□□ -0.38
SIN3A-202ENST00000394947 EIF2B2P49770 351 aaKnown RBP12.7□□□□□ -0.38
SIN3A-202ENST00000394947 CAMK2GQ13555 558 aaPredicted RBP12.7□□□□□ -0.38
SIN3A-202ENST00000394947 DSG4Q86SJ6 1040 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 FIG4Q92562 907 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 TBC1D22BQ9NU19 505 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 GPRC5DQ9NZD1 345 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 IPPQ9Y573 584 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 MYOM2P54296 1465 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 LBPP18428 481 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 DNAJB2P25686 324 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 NCKAP1LP55160 1127 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 CMTM5Q96DZ9 223 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 ZNF304Q9HCX3 659 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 POLR1DQ9Y2S0 133 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 KIAA0586Q9BVV6 1533 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 ASS1P00966 412 aaKnown RBP12.7□□□□□ -0.38
SIN3A-202ENST00000394947 POLBP06746 335 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 CLUP10909 449 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 CTCFP49711 727 aaPredicted RBP12.7□□□□□ -0.38
SIN3A-202ENST00000394947 SGSM1Q2NKQ1 1148 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 R3HCC1LQ7Z5L2 792 aaKnown RBP12.7□□□□□ -0.38
SIN3A-202ENST00000394947 ATG16L2Q8NAA4 619 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 RBBP8NLQ8NC74 664 aaPredicted RBP12.7□□□□□ -0.38
SIN3A-202ENST00000394947 TRIM39Q9HCM9 518 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 ENTPD7Q9NQZ7 604 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 HPS5Q9UPZ3 1129 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 TEX28O15482 410 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 UMPSP11172 480 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 FGFR3P22607 806 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 STIP1P31948 543 aaKnown RBP12.7□□□□□ -0.38
SIN3A-202ENST00000394947 OASLQ15646 514 aaKnown RBP12.7□□□□□ -0.38
SIN3A-202ENST00000394947 CERKQ8TCT0 537 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 KCNK16Q96T55 309 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.7□□□□□ -0.38
SIN3A-202ENST00000394947 SYBUQ9NX95 663 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 PIM2Q9P1W9 311 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 KCNH4Q9UQ05 1017 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 KIF24Q5T7B8 1368 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 FAM47E-STBD1D6RA91 191 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 MAP3K13O43283 966 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 KLHL41O60662 606 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 CYP2E1P05181 493 aaPredicted RBP12.7□□□□□ -0.38
SIN3A-202ENST00000394947 ALOX12P18054 663 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 MAGEA4P43358 317 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 STAT5BP51692 787 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 NCF4Q15080 339 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 E2F7Q96AV8 911 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 CEP41Q9BYV8 373 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 CXorf56Q9H5V9 222 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 IDH3BO43837 385 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 AKAP5P24588 427 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 KRT76Q01546 638 aa12.7□□□□□ -0.38
SIN3A-202ENST00000394947 NFYCQ13952 458 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms