RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PON1P27169 355 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 COPB1P53618 953 aaKnown RBP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 EPHB3P54753 998 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 MFAP3P55082 362 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 ZNF445P59923 1031 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 RPL10AP62906 217 aaKnown RBP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 MMRN1Q13201 1228 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 SMAD2Q15796 467 aaKnown RBP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 HSP90AA4PQ58FG1 418 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 RARS2Q5T160 578 aaKnown RBP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 IQCEQ6IPM2 695 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 PTCRAQ6ISU1 281 aaPredicted RBP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 TRIM65Q6PJ69 517 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 TMC5Q6UXY8 1006 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 SCARA5Q6ZMJ2 495 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 ITIH5Q86UX2 942 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 SPATA2LQ8IUW3 424 aaPredicted RBP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 PPM1KQ8N3J5 372 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 ATAD1Q8NBU5 361 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 LEMD2Q8NC56 503 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 B3GALNT2Q8NCR0 500 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 SMG7Q92540 1137 aaKnown RBP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 ZNF707Q96C28 371 aaPredicted RBP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 PCED1BQ96HM7 432 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 TMEM176AQ96HP8 235 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 PGLYRP2Q96PD5 576 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 ASB2Q96Q27 587 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 CRACR2AQ9BSW2 395 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 ELOVL4Q9GZR5 314 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 INTS2Q9H0H0 1204 aaKnown RBP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 SDCBP2Q9H190 292 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 VPS16Q9H269 839 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 HSD3B7Q9H2F3 369 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 TSPY26PQ9H489 355 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 PIDD1Q9HB75 910 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 CBX8Q9HC52 389 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 AVENQ9NQS1 362 aaPredicted RBP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 EHD2Q9NZN4 543 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 APEX2Q9UBZ4 518 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 PRKAG3Q9UGI9 489 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 USTQ9Y2C2 406 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 INSL5Q9Y5Q6 135 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 ATP8B3O60423 1300 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 ATG2AQ2TAZ0 1938 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 MTCL1Q9Y4B5 1905 aaKnown RBP7.19□□□□□ -1.26
UBBP1-201ENST00000392399 LGALS16A8MUM7 142 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 ZNF197O14709 1029 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 TRIM66O15016 1216 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 ATP2C2O75185 946 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 MICAL2O94851 1124 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 VNN2O95498 520 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 FGF19O95750 216 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 PAEPP09466 180 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 CSH1P0DML2 217 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 CSH2P0DML3 217 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 BMP1P13497 986 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 CD58P19256 250 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 SLC9A1P19634 815 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 RAP1GAPP47736 663 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 CYP27A1Q02318 531 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 TFF2Q03403 129 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 TWF1Q12792 350 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 LRMPQ12912 555 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 CBX2Q14781 532 aaPredicted RBP7.19□□□□□ -1.26
UBBP1-201ENST00000392399 VEPH1Q14D04 833 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 STILQ15468 1287 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 MGAT5BQ3V5L5 792 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 MDH1BQ5I0G3 518 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 TJAP1Q5JTD0 557 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 CYP4A22Q5TCH4 519 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 PHLDB3Q6NSJ2 640 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 ACOT1Q86TX2 421 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 C12orf76Q8N812 135 aaPredicted RBP7.19□□□□□ -1.26
UBBP1-201ENST00000392399 WHAMMQ8TF30 809 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 PSMG2Q969U7 264 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 ELMO3Q96BJ8 720 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 CYFIP2Q96F07 1278 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 SPATA17Q96L03 361 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 C8orf48Q96LL4 319 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 ERGIC2Q96RQ1 377 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 HNRNPABQ99729 332 aaKnown RBP7.19□□□□□ -1.26
UBBP1-201ENST00000392399 PHF7Q9BWX1 381 aaPredicted RBP7.19□□□□□ -1.26
UBBP1-201ENST00000392399 CRISPLD1Q9H336 500 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 WDR6Q9NNW5 1121 aaKnown RBP7.19□□□□□ -1.26
UBBP1-201ENST00000392399 UBE2TQ9NPD8 197 aaPredicted RBP7.19□□□□□ -1.26
UBBP1-201ENST00000392399 PLCB1Q9NQ66 1216 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 CRTAC1Q9NQ79 661 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 PRDM6Q9NQX0 595 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.19□□□□□ -1.26
UBBP1-201ENST00000392399 TMLHEQ9NVH6 421 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 ABI2Q9NYB9 513 aaPredicted RBP7.19□□□□□ -1.26
UBBP1-201ENST00000392399 TAB2Q9NYJ8 693 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.19□□□□□ -1.26
UBBP1-201ENST00000392399 CNTN6Q9UQ52 1028 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 SLC27A5Q9Y2P5 690 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 USP15Q9Y4E8 981 aaPredicted RBP7.19□□□□□ -1.26
UBBP1-201ENST00000392399 YIPF1Q9Y548 306 aa7.19□□□□□ -1.26
UBBP1-201ENST00000392399 ZFP37Q9Y6Q3 630 aaPredicted RBP7.19□□□□□ -1.26
UBBP1-201ENST00000392399 C5orf42Q9H799 3197 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms