RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 POLG2Q9UHN1 485 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 METP08581 1390 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 PLEKHG1Q9ULL1 1385 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 TRIM43BA6NCK2 446 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 HSD17B3P37058 310 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 SERPINB9P50453 376 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 EPHA7Q15375 998 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 PTGISQ16647 500 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 KRT78Q8N1N4 520 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 B3GALNT2Q8NCR0 500 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 MRPS26Q9BYN8 205 aaKnown RBP16.12■□□□□ 0.17
ALK-201ENST00000389048 PTGER2P43116 358 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 TAF5Q15542 800 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 TRIM48Q8IWZ4 208 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 NACC2Q96BF6 587 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 SPATA16Q9BXB7 569 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 TRIM9Q9C026 710 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 SESN1Q9Y6P5 492 aa16.12■□□□□ 0.17
ALK-201ENST00000389048 ATP7AQ04656 1500 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 A0A0G2JLW4 131 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 SAC3D1A6NKF1 404 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 OASLQ15646 514 aaKnown RBP16.11■□□□□ 0.17
ALK-201ENST00000389048 TFB1MQ8WVM0 346 aaKnown RBP16.11■□□□□ 0.17
ALK-201ENST00000389048 SENP2Q9HC62 589 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 A0A1B0GW55 424 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 ITGB3P05106 788 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 DUX4L2P0CJ85 424 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 DUX4L3P0CJ86 424 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 DUX4L4P0CJ87 422 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 DUX4L5P0CJ88 424 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 DUX4L6P0CJ89 424 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 DUX4L7P0CJ90 424 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 GFM2Q969S9 779 aaKnown RBP16.11■□□□□ 0.17
ALK-201ENST00000389048 CNGB3Q9NQW8 809 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 DUX4Q9UBX2 424 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 GRID1Q9ULK0 1009 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 KDM5DQ9BY66 1539 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 PDXKO00764 312 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 COILP38432 576 aaPredicted RBP16.11■□□□□ 0.17
ALK-201ENST00000389048 C12orf60Q5U649 245 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 PCDHB8Q9UN66 801 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 ABCA5Q8WWZ7 1642 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 TP53BP2Q13625 1128 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 ZCWPW2Q504Y3 356 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 USP39Q53GS9 565 aaKnown RBP16.11■□□□□ 0.17
ALK-201ENST00000389048 TYW3Q6IPR3 259 aaKnown RBP16.11■□□□□ 0.17
ALK-201ENST00000389048 C11orf88Q6PI97 169 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 USP49Q70CQ1 688 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 TUFT1Q9NNX1 390 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 UBP1Q9NZI7 540 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 MCM8Q9UJA3 840 aa16.11■□□□□ 0.17
ALK-201ENST00000389048 TCOF1Q13428 1488 aaKnown RBP16.11■□□□□ 0.17
ALK-201ENST00000389048 DNMT1P26358 1616 aaKnown RBP16.11■□□□□ 0.17
ALK-201ENST00000389048 CYP2B6P20813 491 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 TGM2P21980 687 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 GPC1P35052 558 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 EFCAB12Q6NXP0 572 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 SIX5Q8N196 739 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 A0A1B0GTH6 734 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 WEE1P30291 646 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 SOX6P35712 828 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 CASP4P49662 377 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 BFSP2Q13515 415 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 FYNP06241 537 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 RASGRP2Q7LDG7 609 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 TMEM94Q12767 1356 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 TMEM2Q9UHN6 1383 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 VWA5AO00534 786 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 TNPO2O14787 897 aaKnown RBP16.1■□□□□ 0.17
ALK-201ENST00000389048 PSMD3O43242 534 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 SGPL1O95470 568 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 IRAK1P51617 712 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 PRKCEQ02156 737 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 COX10Q12887 443 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 PAN2Q504Q3 1202 aaKnown RBP16.1■□□□□ 0.17
ALK-201ENST00000389048 AGBL2Q5U5Z8 902 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 PAK5Q9P286 719 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 APPL1Q9UKG1 709 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 ITIH6Q6UXX5 1313 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 SLC16A3O15427 465 aaKnown RBP16.1■□□□□ 0.17
ALK-201ENST00000389048 HOXA7P31268 230 aaPredicted RBP16.1■□□□□ 0.17
ALK-201ENST00000389048 RGS4P49798 205 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 PSMC6P62333 389 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 NAB2Q15742 525 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 SGSM1Q2NKQ1 1148 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 ATF7IP2Q5U623 682 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 C11orf63Q6NUN7 778 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 TMC5Q6UXY8 1006 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 TRPC4APQ8TEL6 797 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 SIKE1Q9BRV8 207 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 CEP41Q9BYV8 373 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 FHDC1Q9C0D6 1143 aaPredicted RBP16.1■□□□□ 0.17
ALK-201ENST00000389048 REXO4Q9GZR2 422 aaKnown RBP16.1■□□□□ 0.17
ALK-201ENST00000389048 RIC8BQ9NVN3 520 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 ALG6Q9Y672 507 aa16.1■□□□□ 0.17
ALK-201ENST00000389048 P4HA2O15460 535 aa16.09■□□□□ 0.17
ALK-201ENST00000389048 ITGA4P13612 1032 aa16.09■□□□□ 0.17
ALK-201ENST00000389048 KLRC1P26715 233 aa16.09■□□□□ 0.17
ALK-201ENST00000389048 GPRC5DQ9NZD1 345 aa16.09■□□□□ 0.17
ALK-201ENST00000389048 TRMT6Q9UJA5 497 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms