RNA–Protein interactions for RNA: ENST00000384205.1

RNU6-4P-201, Transcript of RNA, U6 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU6-4P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-4P-201ENST00000384205 HDAC1Q13547 482 aaPredicted RBP3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 BOP1Q14137 746 aaKnown RBP3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 FHL2Q14192 279 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 SF3B3Q15393 1217 aaKnown RBP3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 RBM20Q5T481 1227 aaKnown RBP3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 IGFL4Q6B9Z1 124 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 TMEM108Q6UXF1 575 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 Q6YL49 198 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 Q6ZNX1 250 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 MRGPRGQ86SM5 289 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 DPP9Q86TI2 863 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 DTX2Q86UW9 622 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 MICU3Q86XE3 530 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 YAF2Q8IY57 180 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 MPP5Q8N3R9 675 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 FAM109AQ8N4B1 249 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 SLC30A5Q8TAD4 765 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 SSH3Q8TE77 659 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 SMCR8Q8TEV9 937 aaPredicted RBP3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 SPSB4Q96A44 273 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 PPP1R9BQ96SB3 815 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 ALG8Q9BVK2 526 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 BRIP1Q9BX63 1249 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 TPSD1Q9BZJ3 242 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 TTYH3Q9C0H2 523 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 DHX36Q9H2U1 1008 aaKnown RBP3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 SMOC2Q9H3U7 446 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 PADI4Q9UM07 663 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 PCDHGB6Q9Y5F9 930 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 SNX13Q9Y5W8 968 aa3.39□□□□□ -1.87
RNU6-4P-201ENST00000384205 KAT6AQ92794 2004 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 LOC102723971A0A1B0GUV8 181 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 GRID2IPA4D2P6 1211 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 APAF1O14727 1248 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 IL18RAPO95256 599 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 ONECUT2O95948 504 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 PPP3CBP16298 524 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 CHRM3P20309 590 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 SEC24CP53992 1094 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 LILRA4P59901 499 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 DAG1Q14118 895 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 ERCC6LQ2NKX8 1250 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 PLA1AQ53H76 456 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 HECTD2Q5U5R9 776 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 KIAA0895LQ68EN5 471 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 ZNF627Q7L945 461 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 SESTD1Q86VW0 696 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 COL23A1Q86Y22 540 aaPredicted RBP3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 VRK3Q8IV63 474 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 CCDC146Q8IYE0 955 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 SLC16A11Q8NCK7 471 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 TOR1AIP2Q8NFQ8 470 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 ATRIPQ8WXE1 791 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 MAML1Q92585 1016 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 FBXL20Q96IG2 436 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 COLEC11Q9BWP8 271 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 ACTRT3Q9BYD9 372 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 PCED1AQ9H1Q7 454 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 FAM83DQ9H4H8 585 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 KLC4Q9NSK0 619 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 MRPS18AQ9NVS2 196 aaKnown RBP3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 STK32BQ9NY57 414 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 COL20A1Q9P218 1284 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 LRIT1Q9P2V4 623 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 SH2B3Q9UQQ2 575 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 FAM50BQ9Y247 325 aa3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 WDR33Q9C0J8 1336 aaKnown RBP3.38□□□□□ -1.87
RNU6-4P-201ENST00000384205 PMM2O15305 246 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 SLC16A3O15427 465 aaKnown RBP3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 THAP12O43422 761 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 RASSF9O75901 435 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 NXPH3O95157 252 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 ANXA2P07355 339 aaKnown RBP3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 PARP1P09874 1014 aaKnown RBP3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 SLC5A1P13866 664 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 MPLP40238 635 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 PIK3CBP42338 1070 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 DGKEP52429 567 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 ZNF134P52741 427 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 AK2P54819 239 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 RPS16P62249 146 aaKnown RBP3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 MRPS35P82673 323 aaKnown RBP3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 MYO1EQ12965 1108 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 ARHGEF7Q14155 803 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 SLC29A2Q14542 456 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 C3orf38Q5JPI3 329 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 PLAC9Q5JTB6 97 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 ARHGAP40Q5TG30 622 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 DCAF12L1Q5VU92 463 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 KAZNQ674X7 775 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 ATP11CQ8NB49 1132 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 LPIN2Q92539 896 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 TNIP3Q96KP6 325 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 SNX22Q96L94 193 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 TTPALQ9BTX7 342 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 STK31Q9BXU1 1019 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 EIF2AQ9BY44 585 aaKnown RBP3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 ZCWPW1Q9H0M4 648 aa3.37□□□□□ -1.87
RNU6-4P-201ENST00000384205 STARD7Q9NQZ5 370 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms