RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 HSD17B4P51659 736 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 RBAKQ9NYW8 714 aaPredicted RBP12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 ALG6Q9Y672 507 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 A0A087WXM4 84 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 E2F8A0AVK6 867 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 ALOX12P18054 663 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 PURAQ00577 322 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 PRKG1Q13976 671 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 NEDD8Q15843 81 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 ZNF618Q5T7W0 954 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 OR6Y1Q8NGX8 325 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 OSBPL10Q9BXB5 764 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 RAD51BO15315 384 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 KRT20P35900 424 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 SULF1Q8IWU6 871 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 IL6P05231 212 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 PIK3R1P27986 724 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 KCNJ1P48048 391 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 FOXR1Q6PIV2 292 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 DSTYKQ6XUX3 929 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 CENPLQ8N0S6 344 aaPredicted RBP12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 PRCCQ92733 491 aaPredicted RBP12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 DHX36Q9H2U1 1008 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 HUS1O60921 280 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 GLRA3O75311 464 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 CHN2P52757 468 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 SWT1Q5T5J6 900 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 ANKS3Q6ZW76 656 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 LRRC49Q8IUZ0 686 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 THEM5Q8N1Q8 247 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 KYQ8NBH2 561 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 DNAJC7Q99615 494 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 MRPL39Q9NYK5 338 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 PRR23AA6NEV1 266 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 KLRC1P26715 233 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 TPI1P60174 286 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 DDR2Q16832 855 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 FUT11Q495W5 492 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 AGAP3Q96P47 875 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 BDH2Q9BUT1 245 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 RNPEPL1Q9HAU8 725 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 TRIM39Q9HCM9 518 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 ATXN2Q99700 1313 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 EPHB2P29323 1055 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 FAM83EQ2M2I3 478 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 KCNT1Q5JUK3 1230 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 PDPK2PQ6A1A2 396 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 CCDC126Q96EE4 140 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 SERHL2Q9H4I8 314 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 SERHLQ9NQF3 203 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 IARS2Q9NSE4 1012 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 ATXN10Q9UBB4 475 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 RAB21Q9UL25 225 aa12.89□□□□□ -0.35
SRGAP3-202ENST00000383836 ERVK-7P63135 1459 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 PLEKHG3A1L390 1219 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 ATP6V1B2P21281 511 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 FASP25445 335 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 FCHO2Q0JRZ9 810 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 MIGA2Q7L4E1 593 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 SGMS1Q86VZ5 419 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 VPS37AQ8NEZ2 397 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 PIH1D3Q9NQM4 214 aaKnown RBP12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 WDR35Q9P2L0 1181 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 PEX1O43933 1283 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 GIMAP8Q8ND71 665 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 ATP8B4Q8TF62 1192 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 RORBQ92753 470 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 THUMPD3Q9BV44 507 aaKnown RBP12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 SCN8AQ9UQD0 1980 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 ARHGEF40Q8TER5 1519 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 EVPLQ92817 2033 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 TRAF3Q13114 568 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 DUOXA2Q1HG44 320 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 TCHHL1Q5QJ38 904 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 KRT73Q86Y46 540 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 ERGIC2Q96RQ1 377 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 FHDC1Q9C0D6 1143 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 SAR1AQ9NR31 198 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 METTL5Q9NRN9 209 aaKnown RBP12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 BTN3A3O00478 584 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 IDH3BO43837 385 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 RAG1P15918 1043 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 TRAF2Q12933 501 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 RDM1Q8NG50 284 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 APBB2Q92870 758 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 RSAD1Q9HA92 442 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 CD274Q9NZQ7 290 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 TFR2Q9UP52 801 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 TRAPPC3O43617 180 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 BNIP3LO60238 219 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 RPS6KA5O75582 802 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 ATP5BP06576 529 aaKnown RBP12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 PSMB9P28065 219 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 PDIA5Q14554 519 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 TTC27Q6P3X3 843 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 SH3BP5LQ7L8J4 393 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 ZNF554Q86TJ5 538 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 FAM45AQ8TCE6 357 aa12.88□□□□□ -0.35
SRGAP3-202ENST00000383836 INTS13Q9NVM9 706 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms