RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ZNF233A6NK53 670 aa28.33■■■□□ 2.13
NPHP3-202ENST00000383282 LRP3O75074 770 aa28.33■■■□□ 2.13
NPHP3-202ENST00000383282 TNNC2P02585 160 aa28.33■■■□□ 2.13
NPHP3-202ENST00000383282 TGM1P22735 817 aa28.33■■■□□ 2.13
NPHP3-202ENST00000383282 DMWDQ09019 674 aa28.33■■■□□ 2.13
NPHP3-202ENST00000383282 ZNF268Q14587 947 aaPredicted RBP28.33■■■□□ 2.13
NPHP3-202ENST00000383282 CFAP221Q4G0U5 840 aa28.33■■■□□ 2.13
NPHP3-202ENST00000383282 DPH6Q7L8W6 267 aa28.33■■■□□ 2.13
NPHP3-202ENST00000383282 TRMT2BQ96GJ1 504 aaKnown RBP28.33■■■□□ 2.13
NPHP3-202ENST00000383282 FUBP3Q96I24 572 aaKnown RBP eCLIP28.33■■■□□ 2.13
NPHP3-202ENST00000383282 EBF3Q9H4W6 596 aa28.33■■■□□ 2.13
NPHP3-202ENST00000383282 PARD6AQ9NPB6 346 aa28.33■■■□□ 2.13
NPHP3-202ENST00000383282 INTS13Q9NVM9 706 aa28.33■■■□□ 2.13
NPHP3-202ENST00000383282 GABRDO14764 452 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 HRO43593 1189 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 NOL4O94818 638 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 HOXA6P31267 233 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 ATXN1P54253 815 aaKnown RBP28.32■■■□□ 2.12
NPHP3-202ENST00000383282 AMPD3Q01432 767 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 LMBRD2Q68DH5 695 aaPredicted RBP28.32■■■□□ 2.12
NPHP3-202ENST00000383282 TRIM68Q6AZZ1 485 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 OSTM1Q86WC4 334 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 LINC00301Q8NCQ3 95 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 EXOC4Q96A65 974 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 FAM84AQ96KN4 292 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 MYRFLQ96LU7 910 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 PKMYT1Q99640 499 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 RTKNQ9BST9 563 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 CUEDC2Q9H467 287 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 HPS4Q9NQG7 708 aa28.32■■■□□ 2.12
NPHP3-202ENST00000383282 ATG13O75143 517 aa28.31■■■□□ 2.12
NPHP3-202ENST00000383282 PDGFRLQ15198 375 aa28.31■■■□□ 2.12
NPHP3-202ENST00000383282 C4orf50Q6ZRC1 276 aa28.31■■■□□ 2.12
NPHP3-202ENST00000383282 CEP68Q76N32 757 aa28.31■■■□□ 2.12
NPHP3-202ENST00000383282 SCN4BQ8IWT1 228 aa28.31■■■□□ 2.12
NPHP3-202ENST00000383282 FSIP1Q8NA03 581 aa28.31■■■□□ 2.12
NPHP3-202ENST00000383282 KIAA1586Q9HCI6 787 aa28.31■■■□□ 2.12
NPHP3-202ENST00000383282 TRPC7Q9HCX4 862 aa28.31■■■□□ 2.12
NPHP3-202ENST00000383282 K7ELQ4 463 aaPredicted RBP28.3■■■□□ 2.12
NPHP3-202ENST00000383282 SPTLC2O15270 562 aa28.3■■■□□ 2.12
NPHP3-202ENST00000383282 FAM160A1Q05DH4 1040 aa28.3■■■□□ 2.12
NPHP3-202ENST00000383282 SRSF5Q13243 272 aaKnown RBP28.3■■■□□ 2.12
NPHP3-202ENST00000383282 DUOXA2Q1HG44 320 aa28.3■■■□□ 2.12
NPHP3-202ENST00000383282 SOWAHAQ2M3V2 549 aa28.3■■■□□ 2.12
NPHP3-202ENST00000383282 TMEM196Q5HYL7 178 aa28.3■■■□□ 2.12
NPHP3-202ENST00000383282 SCARA3Q6AZY7 606 aa28.3■■■□□ 2.12
NPHP3-202ENST00000383282 WDR5BQ86VZ2 330 aa28.3■■■□□ 2.12
NPHP3-202ENST00000383282 HPDLQ96IR7 371 aa28.3■■■□□ 2.12
NPHP3-202ENST00000383282 ZNF396Q96N95 335 aaPredicted RBP28.3■■■□□ 2.12
NPHP3-202ENST00000383282 C2orf42Q9NWW7 574 aa28.3■■■□□ 2.12
NPHP3-202ENST00000383282 TRAV19A0A0A6YYK7 116 aa28.29■■■□□ 2.12
NPHP3-202ENST00000383282 TRDMT1O14717 391 aaKnown RBP28.29■■■□□ 2.12
NPHP3-202ENST00000383282 PPP6R2O75170 966 aa28.29■■■□□ 2.12
NPHP3-202ENST00000383282 TADA3O75528 432 aa28.29■■■□□ 2.12
NPHP3-202ENST00000383282 USP17L7P0C7H9 530 aa28.29■■■□□ 2.12
NPHP3-202ENST00000383282 ASIC1P78348 528 aa28.29■■■□□ 2.12
NPHP3-202ENST00000383282 MTF1Q14872 753 aa28.29■■■□□ 2.12
NPHP3-202ENST00000383282 MAPRE1Q15691 268 aaKnown RBP28.29■■■□□ 2.12
NPHP3-202ENST00000383282 CBWD2Q8IUF1 395 aa28.29■■■□□ 2.12
NPHP3-202ENST00000383282 SYT15Q9BQS2 421 aa28.29■■■□□ 2.12
NPHP3-202ENST00000383282 TRIM9Q9C026 710 aa28.29■■■□□ 2.12
NPHP3-202ENST00000383282 KBTBD4Q9NVX7 518 aa28.29■■■□□ 2.12
NPHP3-202ENST00000383282 HSPBP1Q9NZL4 362 aa28.29■■■□□ 2.12
NPHP3-202ENST00000383282 CDH9Q9ULB4 789 aa28.29■■■□□ 2.12
NPHP3-202ENST00000383282 EIF3DO15371 548 aaKnown RBP eCLIP28.28■■■□□ 2.12
NPHP3-202ENST00000383282 ARSAP15289 507 aa28.28■■■□□ 2.12
NPHP3-202ENST00000383282 MAGEA11P43364 429 aa28.28■■■□□ 2.12
NPHP3-202ENST00000383282 FSTL4Q6MZW2 842 aa28.28■■■□□ 2.12
NPHP3-202ENST00000383282 FAM171BQ6P995 826 aa28.28■■■□□ 2.12
NPHP3-202ENST00000383282 WDR49Q8IV35 697 aa28.28■■■□□ 2.12
NPHP3-202ENST00000383282 CPA6Q8N4T0 437 aa28.28■■■□□ 2.12
NPHP3-202ENST00000383282 OR5B17Q8NGF7 314 aa28.28■■■□□ 2.12
NPHP3-202ENST00000383282 SEMA4GQ9NTN9 838 aa28.28■■■□□ 2.12
NPHP3-202ENST00000383282 MAGEC2Q9UBF1 373 aaPredicted RBP28.28■■■□□ 2.12
NPHP3-202ENST00000383282 SLC8A2Q9UPR5 921 aa28.28■■■□□ 2.12
NPHP3-202ENST00000383282 HCRTO43612 131 aa28.27■■■□□ 2.12
NPHP3-202ENST00000383282 CKMP06732 381 aa28.27■■■□□ 2.12
NPHP3-202ENST00000383282 CCDC142Q17RM4 750 aa28.27■■■□□ 2.12
NPHP3-202ENST00000383282 IQUBQ8NA54 791 aa28.27■■■□□ 2.12
NPHP3-202ENST00000383282 GLIS3Q8NEA6 775 aa28.27■■■□□ 2.12
NPHP3-202ENST00000383282 TTC16Q8NEE8 873 aa28.27■■■□□ 2.12
NPHP3-202ENST00000383282 HPS3Q969F9 1004 aa28.27■■■□□ 2.12
NPHP3-202ENST00000383282 DHX58Q96C10 678 aa28.27■■■□□ 2.12
NPHP3-202ENST00000383282 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.27■■■□□ 2.12
NPHP3-202ENST00000383282 PTPRJQ12913 1337 aa28.26■■■□□ 2.11
NPHP3-202ENST00000383282 OTOL1A6NHN0 477 aaPredicted RBP28.26■■■□□ 2.11
NPHP3-202ENST00000383282 FOXD2O60548 495 aaPredicted RBP28.26■■■□□ 2.11
NPHP3-202ENST00000383282 DRD1P21728 446 aa28.26■■■□□ 2.11
NPHP3-202ENST00000383282 IFNAR2P48551 515 aa28.26■■■□□ 2.11
NPHP3-202ENST00000383282 E2F4Q16254 413 aa28.26■■■□□ 2.11
NPHP3-202ENST00000383282 CSRP2Q16527 193 aa28.26■■■□□ 2.11
NPHP3-202ENST00000383282 VSTM1Q6UX27 236 aa28.26■■■□□ 2.11
NPHP3-202ENST00000383282 RIN3Q8TB24 985 aa28.26■■■□□ 2.11
NPHP3-202ENST00000383282 NETO1Q8TDF5 533 aa28.26■■■□□ 2.11
NPHP3-202ENST00000383282 OSCP1Q8WVF1 389 aa28.26■■■□□ 2.11
NPHP3-202ENST00000383282 MYLPFQ96A32 169 aa28.26■■■□□ 2.11
NPHP3-202ENST00000383282 FNBP1Q96RU3 617 aa28.26■■■□□ 2.11
NPHP3-202ENST00000383282 MMS19Q96T76 1030 aa28.26■■■□□ 2.11
NPHP3-202ENST00000383282 DUS2Q9NX74 493 aaKnown RBP28.26■■■□□ 2.11
NPHP3-202ENST00000383282 KIF26AQ9ULI4 1882 aaPredicted RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms