RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SLC27A5Q9Y2P5 690 aa17.24■□□□□ 0.35
SNRPB-201ENST00000381342 TMEM221A6NGB7 291 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 M0R296 226 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 ATP1A3P13637 1013 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 HOXA9P31269 272 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 APBA1Q02410 837 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 GBP6Q6ZN66 633 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 ACOT1Q86TX2 421 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 SUGP1Q8IWZ8 645 aaKnown RBP17.23■□□□□ 0.35
SNRPB-201ENST00000381342 PPM1KQ8N3J5 372 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 EHBP1Q8NDI1 1231 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 SPPL2BQ8TCT7 592 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 KAT5Q92993 513 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 SEPT5Q99719 369 aaPredicted RBP17.23■□□□□ 0.35
SNRPB-201ENST00000381342 VPS16Q9H269 839 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 CISHQ9NSE2 258 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 PCDHB5Q9Y5E4 795 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 PATJQ8NI35 1801 aa17.23■□□□□ 0.35
SNRPB-201ENST00000381342 CLUHO75153 1309 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 MYH10P35580 1976 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 NOTCH4Q99466 2003 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 GTPBP10A4D1E9 387 aaKnown RBP17.22■□□□□ 0.35
SNRPB-201ENST00000381342 SMTNL1A8MU46 457 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 BECN2A8MW95 431 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 CILPO75339 1184 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 LRG1P02750 347 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 PTPN1P18031 435 aaKnown RBP17.22■□□□□ 0.35
SNRPB-201ENST00000381342 SLC9A1P19634 815 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 CYP27A1Q02318 531 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 TWF1Q12792 350 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 NFE2Q16621 373 aaPredicted RBP17.22■□□□□ 0.35
SNRPB-201ENST00000381342 EXOC3L4Q17RC7 722 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 MGAT5BQ3V5L5 792 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 FAM171BQ6P995 826 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 TRIM65Q6PJ69 517 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 LUZP1Q86V48 1076 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 SPATA2LQ8IUW3 424 aaPredicted RBP17.22■□□□□ 0.35
SNRPB-201ENST00000381342 C2orf15Q8WU43 125 aaKnown RBP17.22■□□□□ 0.35
SNRPB-201ENST00000381342 FAXDC2Q96IV6 333 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNRPB-201ENST00000381342 LIMA1Q9UHB6 759 aaKnown RBP17.22■□□□□ 0.35
SNRPB-201ENST00000381342 MAFFQ9ULX9 164 aa17.22■□□□□ 0.35
SNRPB-201ENST00000381342 PAPLNO95428 1278 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 TBXAS1P24557 533 aaPredicted RBP17.21■□□□□ 0.35
SNRPB-201ENST00000381342 CYP2F1P24903 491 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 COPB1P53618 953 aaKnown RBP17.21■□□□□ 0.35
SNRPB-201ENST00000381342 SMARCB1Q12824 385 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 MAPRE1Q15691 268 aaKnown RBP17.21■□□□□ 0.35
SNRPB-201ENST00000381342 ZNF394Q53GI3 561 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 GJB7Q6PEY0 223 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 LRSAM1Q6UWE0 723 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 RRAGAQ7L523 313 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 BMP8AQ7Z5Y6 402 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 UNC93AQ86WB7 457 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 ANKRD20A12PQ8NF67 263 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 MYCBPAPQ8TBZ2 947 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 WHAMMQ8TF30 809 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 PCED1BQ96HM7 432 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 TNIP3Q96KP6 325 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 ELOVL4Q9GZR5 314 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 HCFC1R1Q9NWW0 138 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 GREB1Q4ZG55 1949 aa17.21■□□□□ 0.35
SNRPB-201ENST00000381342 OBSL1O75147 1896 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 CLDN5O00501 218 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 TPM2P07951 284 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 HAPLN1P10915 354 aaPredicted RBP17.2■□□□□ 0.34
SNRPB-201ENST00000381342 ATF6P18850 670 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 CDK11BP21127 795 aaKnown RBP17.2■□□□□ 0.34
SNRPB-201ENST00000381342 PON1P27169 355 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 GPR15P49685 360 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 NTHL1P78549 312 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 CFAP221Q4G0U5 840 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 PHLDB3Q6NSJ2 640 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 C4orf50Q6ZRC1 276 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 APTXQ7Z2E3 356 aaKnown RBP17.2■□□□□ 0.34
SNRPB-201ENST00000381342 UBR7Q8N806 425 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 STKLD1Q8NE28 680 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 KREMEN1Q96MU8 473 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 NT5C1AQ9BXI3 368 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 B3GNT5Q9BYG0 378 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 TSPY26PQ9H489 355 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 ABCB6Q9NP58 842 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 SIX2Q9NPC8 291 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 FAM49BQ9NUQ9 324 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 CEP72Q9P209 647 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 IGSF9Q9P2J2 1179 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 HSFX1Q9UBD0 423 aa17.2■□□□□ 0.34
SNRPB-201ENST00000381342 ARIH1Q9Y4X5 557 aaPredicted RBP17.2■□□□□ 0.34
SNRPB-201ENST00000381342 LGALS16A8MUM7 142 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 ASGR2P07307 311 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 POU2F2P09086 479 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 CCDC130P13994 396 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 BDNFP23560 247 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 FSHRP23945 695 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 ALDH1A3P47895 512 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 YWHAEP62258 255 aaKnown RBP17.19■□□□□ 0.34
SNRPB-201ENST00000381342 GCNT1Q02742 428 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 TDGQ13569 410 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 HFE2Q6ZVN8 426 aa17.19■□□□□ 0.34
SNRPB-201ENST00000381342 GET4Q7L5D6 327 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms