RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TNS3Q68CZ2 1445 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 PLCH1Q4KWH8 1693 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 MYO18AQ92614 2054 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 LCA5LO95447 670 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 GSTT1P30711 240 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 PTENP60484 403 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 MAPK7Q13164 816 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 XRRA1Q6P2D8 792 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 KAT2BQ92831 832 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 PCYOX1Q9UHG3 505 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 LGALS13Q9UHV8 139 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 HPSEQ9Y251 543 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 UBR2Q8IWV8 1755 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 KLRF2D3W0D1 207 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SRGAP2CP0DJJ0 459 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 CCNB1P14635 433 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 EIF4A3P38919 411 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 GUCY2FP51841 1108 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 GRAMD1BQ3KR37 738 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 SNRNP48Q6IEG0 339 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 USP17L2Q6R6M4 530 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 BARGINQ6ZT62 677 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ANKRD23Q86SG2 305 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ADCY4Q8NFM4 1077 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 GDAP1Q8TB36 358 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 TSPAN18Q96SJ8 248 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 STK33Q9BYT3 514 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ANKZF1Q9H8Y5 726 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 GCNT4Q9P109 453 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 CRNNQ9UBG3 495 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 CDV3Q9UKY7 258 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 P4HBP07237 508 aaKnown RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ARID5BQ14865 1188 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 HERC3Q15034 1050 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 REXO1L1PQ8IX06 675 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 EFHBQ8N7U6 833 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 C15orf40Q8WUR7 153 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 OTUB1Q96FW1 271 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-203ENST00000381196 WDR24Q96S15 920 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 EPAS1Q99814 870 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 MYL10Q9BUA6 226 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 TSSK1BQ9BXA7 367 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ADAM28Q9UKQ2 775 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 DOCK2Q92608 1830 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 TRIOBPQ9H2D6 2365 aa5.08□□□□□ -1.6
PTPRD-203ENST00000381196 ISPDA4D126 451 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 RBAK-RBAKDNI3L0D1 243 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 MAGEB3O15480 346 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 FGGP02679 453 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 EHHADHQ08426 723 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 RCN1Q15293 331 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 HP1BP3Q5SSJ5 553 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TMEM63BQ5T3F8 832 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CASC4Q6P4E1 433 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 KRT74Q7RTS7 529 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CABP7Q86V35 215 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 NUP93Q8N1F7 819 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 HELQQ8TDG4 1101 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 FNIP1Q8TF40 1166 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 RNF139Q8WU17 664 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PDCD6IPQ8WUM4 868 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 BTBD10Q9BSF8 475 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 NOVA2Q9UNW9 492 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 MARF1Q9Y4F3 1742 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ROBO2Q9HCK4 1378 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PLK4O00444 970 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 NEMP1O14524 444 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TRIM24O15164 1050 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CD3EAPO15446 510 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 FDX1P10109 184 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 THRAP10827 490 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CETPP11597 493 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 FCGRTP55899 365 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 GPC5P78333 572 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ELF3P78545 371 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 MRPS15P82914 257 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 MYL7Q01449 175 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 BBS9Q3SYG4 887 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TWF2Q6IBS0 349 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 DSTYKQ6XUX3 929 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 UNC45BQ8IWX7 931 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 SCUBE1Q8IWY4 988 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 KIAA2013Q8IYS2 634 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ABTB1Q969K4 478 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CEP170P1Q96L14 293 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 METTL5Q9NRN9 209 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 PARVAQ9NVD7 372 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 MKS1Q9NXB0 559 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ATPIF1Q9UII2 106 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 R3HDM2Q9Y2K5 976 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 SOWAHDA6NJG2 315 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 C2CD2LO14523 706 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 MED26O95402 600 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 LDHAP00338 332 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 CYP2C9P11712 490 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 FGFR3P22607 806 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 ADARP55265 1226 aaKnown RBP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TYSND1Q2T9J0 566 aa5.07□□□□□ -1.6
PTPRD-203ENST00000381196 DDX42Q86XP3 938 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTPRD-203ENST00000381196 TDRPQ86YL5 185 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms