RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 TUBGCP2Q9BSJ2 902 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 TP63Q9H3D4 680 aaPredicted RBP9.79□□□□□ -0.84
PTPRA-204ENST00000380393 RUBCNLQ9H714 662 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 CYLDQ9NQC7 956 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.79□□□□□ -0.84
PTPRA-204ENST00000380393 ABI2Q9NYB9 513 aaPredicted RBP9.79□□□□□ -0.84
PTPRA-204ENST00000380393 KCNN3Q9UGI6 736 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 SNX24Q9Y343 169 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 PAPPAQ13219 1627 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 TAF4O00268 1085 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 SNPHO15079 494 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 FOXP2O15409 715 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 ARHGEF15O94989 841 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 PCNAP12004 261 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 CXCR2P25025 360 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 KLRC1P26715 233 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 LONP1P36776 959 aaKnown RBP9.79□□□□□ -0.84
PTPRA-204ENST00000380393 IL6STP40189 918 aaPredicted RBP9.79□□□□□ -0.84
PTPRA-204ENST00000380393 EPS15P42566 896 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 TFAP4Q01664 338 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 CHRNEQ04844 493 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 TTI2Q6NXR4 508 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 TPTE2Q6XPS3 522 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 ATG9AQ7Z3C6 839 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 POU5F2Q8N7G0 328 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 GDPD5Q8WTR4 605 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 HERVK_113Q902F9 699 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 RMDN1Q96DB5 314 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 SGF29Q96ES7 293 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 C1orf74Q96LT6 269 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 FERMT1Q9BQL6 677 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 TUBB6Q9BUF5 446 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 ARMC1Q9NVT9 282 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 LAMA4Q16363 1823 aa9.79□□□□□ -0.84
PTPRA-204ENST00000380393 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.79□□□□□ -0.84
PTPRA-204ENST00000380393 J3QRK9 145 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 MYO1DO94832 1006 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 KLHL2O95198 593 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 TRIP10Q15642 601 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 NFE2Q16621 373 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-204ENST00000380393 MAPK6Q16659 721 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 TRMT5Q32P41 509 aaKnown RBP9.78□□□□□ -0.84
PTPRA-204ENST00000380393 CYP4A22Q5TCH4 519 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 SUSD4Q5VX71 490 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 RGS9BPQ6ZS82 235 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 GPR141Q7Z602 305 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 DEFB132Q7Z7B7 95 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 NLRX1Q86UT6 975 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 SLC51AQ86UW1 340 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 FBXL8Q96CD0 374 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 CCDC77Q9BR77 488 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 PLEKHA5Q9HAU0 1116 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 TRMT112Q9UI30 125 aaKnown RBP9.78□□□□□ -0.84
PTPRA-204ENST00000380393 KLF15Q9UIH9 416 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 GNPTGQ9UJJ9 305 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 NIP7Q9Y221 180 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTPRA-204ENST00000380393 UTYO14607 1347 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 EYA2O00167 538 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 UGT1A9O60656 530 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 SULT1C4O75897 302 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 CAMTA2O94983 1202 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 KRT6AP02538 564 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 KRT6BP04259 564 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 UGT1A6P19224 532 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 POLR2CP19387 275 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-204ENST00000380393 UGT1A1P22309 533 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 UGT1A4P22310 534 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 CFL1P23528 166 aaKnown RBP9.78□□□□□ -0.84
PTPRA-204ENST00000380393 MCM7P33993 719 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 UGT1A3P35503 534 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 UGT1A5P35504 534 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 GNG2P59768 71 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 MCCD1P59942 119 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-204ENST00000380393 ZBTB16Q05516 673 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 EN1Q05925 392 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-204ENST00000380393 ITGADQ13349 1161 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 TLR1Q15399 786 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 RRAGAQ7L523 313 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 RIOK1Q9BRS2 568 aaKnown RBP9.78□□□□□ -0.84
PTPRA-204ENST00000380393 NAPBQ9H115 298 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 GOLPH3Q9H4A6 298 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 UGT1A7Q9HAW7 530 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 UGT1A10Q9HAW8 530 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 UGT1A8Q9HAW9 530 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 FAM207AQ9NSI2 230 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-204ENST00000380393 ZDHHC18Q9NUE0 388 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 ZSWIM5Q9P217 1185 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 RPTORQ8N122 1335 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 CACNA1FO60840 1977 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 GOLGA8QA0A0J9YX86 632 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 GOLGA8OA6NCC3 632 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 PABPN1LA6NDY0 278 aaKnown RBP9.78□□□□□ -0.84
PTPRA-204ENST00000380393 GOLGA8NF8WBI6 632 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 GOLGA8RI6L899 631 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 RIPK2O43353 540 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 RSL1D1O76021 490 aaKnown RBP9.78□□□□□ -0.84
PTPRA-204ENST00000380393 CCDC130P13994 396 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 CASP7P55210 303 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 SLC9C1Q4G0N8 1177 aa9.78□□□□□ -0.84
PTPRA-204ENST00000380393 XKR5Q6UX68 686 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms