RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 ATG9AQ7Z3C6 839 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 EIF2AK1Q9BQI3 630 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 METTL5Q9NRN9 209 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 PKD2L1Q9P0L9 805 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 PRPF19Q9UMS4 504 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 PCDHA10Q9Y5I2 948 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 CASP2P42575 452 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 SPIDRQ14159 915 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 AARS2Q5JTZ9 985 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 LPCAT2Q7L5N7 544 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 RBM46Q8TBY0 533 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 RNF139Q8WU17 664 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 OXNAD1Q96HP4 312 aaPredicted RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 NPHP4O75161 1426 aaPredicted RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 INO80B-WBP1J3KQ70 363 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 TGDSO95455 350 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 GLI1P08151 1106 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 AMPD2Q01433 879 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 MS4A14Q96JA4 679 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 MED10Q9BTT4 135 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 KATNAL1Q9BW62 490 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 LACRTQ9GZZ8 138 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 HEY2Q9UBP5 337 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 RWDD3Q9Y3V2 267 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 MAPK1P28482 360 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 IL12AP29459 219 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 KLHL12Q53G59 568 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 NSUN6Q8TEA1 469 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 SAT1P21673 171 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 CDC25AP30304 524 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 ADARP55265 1226 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 KRT72Q14CN4 511 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 ZDHHC17Q8IUH5 632 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 TMEM126BQ8IUX1 230 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 MICU2Q8IYU8 434 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 TCF7L2Q9NQB0 619 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 PTTG2Q9NZH5 202 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 HSPBP1Q9NZL4 362 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 AURKCQ9UQB9 309 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 EFR3BQ9Y2G0 817 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 GMEB1Q9Y692 573 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 EVPLLA8MZ36 301 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 CFAP99D6REC4 459 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 DNAJC6O75061 913 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 TGM2P21980 687 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 PTDSS1P48651 473 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 RAB25P57735 213 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 GRAPQ13588 217 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 FASTKD1Q53R41 847 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 CPXCR1Q8N123 301 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 GRAPLQ8TC17 118 aaPredicted RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 SEPT1Q8WYJ6 367 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 MRPL48Q96GC5 212 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 HEXIM2Q96MH2 286 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 SLC8A2Q9UPR5 921 aa9.16□□□□□ -0.94
SHROOM4-202ENST00000376020 CAND2O75155 1236 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 ANXA9O76027 345 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 VIL1P09327 827 aaKnown RBP9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 RALBP11234 206 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 FCER1AP12319 257 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 SERPINB5P36952 375 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 GRIK1P39086 918 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 ST13P50502 369 aaKnown RBP9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 ADCY1Q08828 1119 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 TOP3AQ13472 1001 aaPredicted RBP9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 ZNF394Q53GI3 561 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 C12orf60Q5U649 245 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 MAEAQ7L5Y9 396 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 COG4Q9H9E3 785 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 HNRNPCL2B2RXH8 293 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 RBAK-RBAKDNI3L0D1 243 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 ANXA6P08133 673 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 RBP3P10745 1247 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 CHRNB3Q05901 458 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 PTPROQ16827 1216 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 DGUOKQ16854 277 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 USP17L2Q6R6M4 530 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 BBS7Q8IWZ6 715 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 TMC2Q8TDI7 906 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 FBXO28Q9NVF7 368 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 DRG1Q9Y295 367 aaKnown RBP9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 TPRKBQ9Y3C4 175 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 LAMA4Q16363 1823 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 TRIM49P0CI25 452 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 TRIM49CP0CI26 452 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 FASP25445 335 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 SERPINH1P50454 418 aaKnown RBP9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 ALDH5A1P51649 535 aaPredicted RBP9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 KCNK10P57789 538 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 DPYSQ14117 519 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 P3H2Q8IVL5 708 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 KIF2BQ8N4N8 673 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 TRIM51Q9BSJ1 452 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 SLC25A23Q9BV35 468 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 RAD21L1Q9H4I0 556 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 CCNB1IP1Q9NPC3 277 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 USE1Q9NZ43 259 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 LCA5LO95447 670 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 SLC2A3P11169 496 aa9.15□□□□□ -0.94
SHROOM4-202ENST00000376020 PPP6R3Q5H9R7 873 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms