RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 CPSF2Q9P2I0 782 aaKnown RBP22.2■■□□□ 1.14
UPF3A-202ENST00000375299 TCEAL9Q9UHQ7 104 aa22.2■■□□□ 1.14
UPF3A-202ENST00000375299 SNCAIPQ9Y6H5 919 aa22.2■■□□□ 1.14
UPF3A-202ENST00000375299 YDJCA8MPS7 323 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 WDR64B1ANS9 1081 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 PLSCR1O15162 318 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 GSTA2P09210 222 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 PSMD6Q15008 389 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 ANKRD22Q5VYY1 191 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 ANO5Q75V66 913 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 ZC3H18Q86VM9 953 aaKnown RBP22.19■■□□□ 1.14
UPF3A-202ENST00000375299 CHSY1Q86X52 802 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 RHPN2Q8IUC4 686 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 SCYL3Q8IZE3 742 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 SLC35B2Q8TB61 432 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 WDR83Q9BRX9 315 aaKnown RBP22.19■■□□□ 1.14
UPF3A-202ENST00000375299 C17orf75Q9HAS0 396 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 APOBEC3GQ9HC16 384 aaKnown RBP22.19■■□□□ 1.14
UPF3A-202ENST00000375299 WDR35Q9P2L0 1181 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 EXTL3O43909 919 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 PIAS1O75925 651 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 CCNE2O96020 404 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 ICAM1P05362 532 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 ESRRAP11474 423 aaPredicted RBP22.19■■□□□ 1.14
UPF3A-202ENST00000375299 CHRNA5P30532 468 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 CDKN2BP42772 138 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 TXNRD3NBQ6F5E7 133 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.19■■□□□ 1.14
UPF3A-202ENST00000375299 FBXO36Q8NEA4 188 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 CPT1BQ92523 772 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 ACSF2Q96CM8 615 aaPredicted RBP22.19■■□□□ 1.14
UPF3A-202ENST00000375299 TRAPPC9Q96Q05 1148 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 ZNF212Q9UDV6 495 aa22.19■■□□□ 1.14
UPF3A-202ENST00000375299 ARID2Q68CP9 1835 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 KLHL33A6NCF5 533 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 LPXNO60711 386 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 VNN1O95497 513 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 DHRS4L1P0CG22 281 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 MMP8P22894 467 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 HSPA1LP34931 641 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 GCLCP48506 637 aaPredicted RBP22.18■■□□□ 1.14
UPF3A-202ENST00000375299 WNT7BP56706 349 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 PRKD1Q15139 912 aaPredicted RBP22.18■■□□□ 1.14
UPF3A-202ENST00000375299 NAT8LQ8N9F0 302 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 DTX3LQ8TDB6 740 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 CLEC4DQ8WXI8 215 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 ETAA1Q9NY74 926 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 DDX56Q9NY93 547 aaKnown RBP22.18■■□□□ 1.14
UPF3A-202ENST00000375299 E7ESA3 106 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 F8VP50 259 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 AP1G2O75843 785 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 KCNA3P22001 575 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 SFNP31947 248 aa22.18■■□□□ 1.14
UPF3A-202ENST00000375299 LBHD1Q9BQE6 289 aaPredicted RBP22.18■■□□□ 1.14
UPF3A-202ENST00000375299 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.18■■□□□ 1.14
UPF3A-202ENST00000375299 WDR81Q562E7 1941 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 CLRN2A0PK11 232 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 A8MXQ7 604 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 DLDP09622 509 aaKnown RBP22.17■■□□□ 1.14
UPF3A-202ENST00000375299 PALM2Q8IXS6 379 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 MCEEQ96PE7 176 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 TMOD2Q9NZR1 351 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 CNTN6Q9UQ52 1028 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 PTPRJQ12913 1337 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 MAGEA13PA6NCF6 341 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 MAP3K7O43318 606 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 RARBP10826 455 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 ETV4P43268 484 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 OGDHQ02218 1023 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 FAM91A1Q658Y4 838 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 CIAPIN1Q6FI81 312 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 TAS1R3Q7RTX0 852 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 ARHGAP24Q8N264 748 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 PHC3Q8NDX5 983 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 ZNRF3Q9ULT6 936 aa22.17■■□□□ 1.14
UPF3A-202ENST00000375299 SPDYE2BA6NHP3 402 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 MT-ND3P03897 115 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 SPDYE6P0CI01 402 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 PTGER2P43116 358 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 NEK3P51956 506 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 GDF10P55107 478 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 KRT76Q01546 638 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 PPP1R15BQ5SWA1 713 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 MCF2L2Q86YR7 1114 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 PDCD7Q8N8D1 485 aaKnown RBP22.16■■□□□ 1.14
UPF3A-202ENST00000375299 GATA6Q92908 595 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 OXNAD1Q96HP4 312 aaPredicted RBP22.16■■□□□ 1.14
UPF3A-202ENST00000375299 APOPT1Q96IL0 206 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 CEP170P1Q96L14 293 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 IL1BP01584 269 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 EIF2AK2P19525 551 aaKnown RBP22.16■■□□□ 1.14
UPF3A-202ENST00000375299 CAP2P40123 477 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 CACNA2D1P54289 1103 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 THOC5Q13769 683 aaKnown RBP22.16■■□□□ 1.14
UPF3A-202ENST00000375299 DLGAP5Q15398 846 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 DNAJC24Q6P3W2 148 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 TTC7BQ86TV6 843 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 TTC17Q96AE7 1141 aa22.16■■□□□ 1.14
UPF3A-202ENST00000375299 IQANK1A0A1B0GTG1 560 aa22.15■■□□□ 1.14
UPF3A-202ENST00000375299 TCRBV5S1A1TA0A578 114 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms