RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 CHRDQ9H2X0 955 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 CLSTN2Q9H4D0 955 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 ZNF334Q9HCZ1 680 aaPredicted RBP16.26■□□□□ 0.19
SS18L1-202ENST00000370848 FRMD4BQ9Y2L6 1034 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 ASB3Q9Y575 518 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 SNX9Q9Y5X1 595 aa16.26■□□□□ 0.19
SS18L1-202ENST00000370848 PPP1R3GB7ZBB8 358 aa16.25■□□□□ 0.19
SS18L1-202ENST00000370848 C4BPAP04003 597 aaKnown RBP16.25■□□□□ 0.19
SS18L1-202ENST00000370848 CD72P21854 359 aa16.25■□□□□ 0.19
SS18L1-202ENST00000370848 MYL6P60660 151 aa16.25■□□□□ 0.19
SS18L1-202ENST00000370848 EDRF1Q3B7T1 1238 aa16.25■□□□□ 0.19
SS18L1-202ENST00000370848 C1orf228Q6PIY5 440 aa16.25■□□□□ 0.19
SS18L1-202ENST00000370848 HS6ST3Q8IZP7 471 aa16.25■□□□□ 0.19
SS18L1-202ENST00000370848 SHKBP1Q8TBC3 707 aa16.25■□□□□ 0.19
SS18L1-202ENST00000370848 GBP4Q96PP9 640 aa16.25■□□□□ 0.19
SS18L1-202ENST00000370848 MKNK1Q9BUB5 465 aa16.25■□□□□ 0.19
SS18L1-202ENST00000370848 SPATA6Q9NWH7 488 aaPredicted RBP16.25■□□□□ 0.19
SS18L1-202ENST00000370848 ZSCAN32Q9NX65 697 aa16.25■□□□□ 0.19
SS18L1-202ENST00000370848 MTMR11A4FU01 709 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 VNN1O95497 513 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 ACAT1P24752 427 aaKnown RBP16.24■□□□□ 0.19
SS18L1-202ENST00000370848 CCNE1P24864 410 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 VAMP7P51809 220 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 CLDN10P78369 228 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 BIRC3Q13489 604 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 CCDC142Q17RM4 750 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 SOWAHAQ2M3V2 549 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 METTL23Q86XA0 190 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 ZC3H3Q8IXZ2 948 aaKnown RBP16.24■□□□□ 0.19
SS18L1-202ENST00000370848 TTC9BQ8N6N2 239 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 ZSCAN18Q8TBC5 510 aaPredicted RBP16.24■□□□□ 0.19
SS18L1-202ENST00000370848 GPT2Q8TD30 523 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 TMC2Q8TDI7 906 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 PSMG2Q969U7 264 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 BRD9Q9H8M2 597 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 GDAP2Q9NXN4 497 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 OBP2AQ9NY56 170 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 DLL3Q9NYJ7 618 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 KIAA1468Q9P260 1216 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 DSEQ9UL01 958 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 CTNND2Q9UQB3 1225 aa16.24■□□□□ 0.19
SS18L1-202ENST00000370848 MAPK13O15264 365 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 PHACTR2O75167 634 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 PAPSS2O95340 614 aaPredicted RBP16.23■□□□□ 0.19
SS18L1-202ENST00000370848 FGF19O95750 216 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 RPL13P26373 211 aaKnown RBP16.23■□□□□ 0.19
SS18L1-202ENST00000370848 PSMC2P35998 433 aaKnown RBP16.23■□□□□ 0.19
SS18L1-202ENST00000370848 STX17P56962 302 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 PPP3CAQ08209 521 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 GRM2Q14416 872 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 SLC39A12Q504Y0 691 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 LRRTM3Q86VH5 581 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 ADGRF2Q8IZF7 708 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 ATAD1Q8NBU5 361 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 KBTBD7Q8WVZ9 684 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 NELFBQ8WX92 580 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 TSG101Q99816 390 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 DUSP9Q99956 384 aaKnown RBP16.23■□□□□ 0.19
SS18L1-202ENST00000370848 ZCWPW1Q9H0M4 648 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 XYLT2Q9H1B5 865 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 MMRN2Q9H8L6 949 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.23■□□□□ 0.191e-10■■■■■ 287.3
SS18L1-202ENST00000370848 TMLHEQ9NVH6 421 aa16.23■□□□□ 0.19
SS18L1-202ENST00000370848 DENND4CQ5VZ89 1909 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 PSMA7O14818 248 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 CETN3O15182 167 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 CHADO15335 359 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 HUS1O60921 280 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 SOAT2O75908 522 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 GCLMP48507 274 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 SMARCB1Q12824 385 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 MYO1EQ12965 1108 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 DUSP4Q13115 394 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 MTAPQ13126 283 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 TRPC3Q13507 836 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 STIM1Q13586 685 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 NCOA4Q13772 614 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 TEAD2Q15562 447 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 ZACNQ401N2 412 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 TTI2Q6NXR4 508 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 INTS8Q75QN2 995 aaKnown RBP16.22■□□□□ 0.19
SS18L1-202ENST00000370848 GAREM2Q75VX8 874 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 SV2AQ7L0J3 742 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 LIMS2Q7Z4I7 341 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 TOP6BLQ8N6T0 577 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 RMDN1Q96DB5 314 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 RSPRY1Q96DX4 576 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 DHTKD1Q96HY7 919 aaPredicted RBP16.22■□□□□ 0.19
SS18L1-202ENST00000370848 MRPL45Q9BRJ2 306 aaKnown RBP16.22■□□□□ 0.19
SS18L1-202ENST00000370848 NUP62CLQ9H1M0 184 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 SLC27A5Q9Y2P5 690 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 R3HCC1Q9Y3T6 440 aaKnown RBP16.22■□□□□ 0.19
SS18L1-202ENST00000370848 NME7Q9Y5B8 376 aa16.22■□□□□ 0.19
SS18L1-202ENST00000370848 HEPACAM2A8MVW5 462 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 EPB41P11171 864 aaKnown RBP16.21■□□□□ 0.19
SS18L1-202ENST00000370848 CHRNB1P11230 501 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 MYL4P12829 197 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 KRT13P13646 458 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 GDI1P31150 447 aa16.21■□□□□ 0.19
SS18L1-202ENST00000370848 VIPR2P41587 438 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms