RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 TMEM150BA6NC51 233 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 TRIM66O15016 1216 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 C6orf118Q5T5N4 469 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 MTHFD1LQ6UB35 978 aa11.22□□□□□ -0.61
PTPRK-205ENST00000368213 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.22□□□□□ -0.611e-9■■□□□ 13.8
PTPRK-205ENST00000368213 PPWD1Q96BP3 646 aaKnown RBP11.22□□□□□ -0.61
PTPRK-205ENST00000368213 PURBQ96QR8 312 aaKnown RBP11.22□□□□□ -0.61
PTPRK-205ENST00000368213 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTPRK-205ENST00000368213 FAM95CA0A1B0GW59 222 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 SLC9A3R1O14745 358 aaPredicted RBP11.21□□□□□ -0.61
PTPRK-205ENST00000368213 CXCL14O95715 111 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 EIF4BP23588 611 aaKnown RBP11.21□□□□□ -0.61
PTPRK-205ENST00000368213 USP41Q3LFD5 358 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 BOLA3Q53S33 107 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 PLPP4Q5VZY2 271 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 SARM1Q6SZW1 724 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 CEP68Q76N32 757 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 OTOP1Q7RTM1 612 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 ZNF720Q7Z2F6 126 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 PHACTR4Q8IZ21 702 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 SNX31Q8N9S9 440 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 TMC2Q8TDI7 906 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 TSPAN17Q96FV3 270 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 DMAP1Q9NPF5 467 aaPredicted RBP11.21□□□□□ -0.61
PTPRK-205ENST00000368213 ZMYM2Q9UBW7 1377 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 LACTBL1A8MY62 500 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 ATMINO43313 823 aaPredicted RBP11.21□□□□□ -0.61
PTPRK-205ENST00000368213 SELPP16109 830 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 HMOX2P30519 316 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 PRKCZQ05513 592 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 PLCL1Q15111 1095 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 KCNA10Q16322 511 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 TSNAXIP1Q2TAA8 658 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 GJB7Q6PEY0 223 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 ELMO2Q96JJ3 720 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 IL25Q9H293 177 aa11.21□□□□□ -0.61
PTPRK-205ENST00000368213 C2orf81A6NN90 581 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 CFLARO15519 480 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 GNRH1P01148 92 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 PYGLP06737 847 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 TBX4P57082 545 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 GEMIN4P57678 1058 aaKnown RBP11.21□□□□□ -0.62
PTPRK-205ENST00000368213 SLC18A3Q16572 532 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 RD3Q7Z3Z2 195 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 DDIASQ8IXT1 998 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 FBXO22Q8NEZ5 403 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 A0A087WUV0 522 aaPredicted RBP11.21□□□□□ -0.62
PTPRK-205ENST00000368213 HEATR9A2RTY3 570 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 PMPCBO75439 489 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 SETSIPP0DME0 302 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 CSE1LP55060 971 aaKnown RBP11.21□□□□□ -0.62
PTPRK-205ENST00000368213 SPDYE7PQ495Y7 208 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 ACAD11Q709F0 780 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 CCDC60Q8IWA6 550 aaPredicted RBP11.21□□□□□ -0.62
PTPRK-205ENST00000368213 SPATA18Q8TC71 538 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 CALML6Q8TD86 181 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 SLC26A7Q8TE54 656 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 KDM4CQ9H3R0 1056 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 CERS4Q9HA82 394 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 EVA1BQ9NVM1 165 aa11.21□□□□□ -0.62
PTPRK-205ENST00000368213 TRAV19A0A0A6YYK7 116 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 ANXA9O76027 345 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 CHRM3P20309 590 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 HIF1AQ16665 826 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 KLHDC7AQ5VTJ3 777 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 ERAP2Q6P179 960 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 SLFN11Q7Z7L1 901 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 BLOC1S5Q8TDH9 187 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 SPDL1Q96EA4 605 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 OSGEPL1Q9H4B0 414 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 CPSF2Q9P2I0 782 aaKnown RBP11.2□□□□□ -0.62
PTPRK-205ENST00000368213 SLC39A10Q9ULF5 831 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 ST3GAL5Q9UNP4 418 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 NPM3O75607 178 aaKnown RBP11.2□□□□□ -0.62
PTPRK-205ENST00000368213 ATP1A1P05023 1023 aaKnown RBP11.2□□□□□ -0.62
PTPRK-205ENST00000368213 PHKG1Q16816 387 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 UGP2Q16851 508 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 COBLL1Q53SF7 1204 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 TIGD7Q6NT04 549 aaPredicted RBP11.2□□□□□ -0.62
PTPRK-205ENST00000368213 RETSATQ6NUM9 610 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 LRRC43Q8N309 656 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 ATL2Q8NHH9 583 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 SUSD6Q92537 303 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 ERLEC1Q96DZ1 483 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 DDX47Q9H0S4 455 aaKnown RBP11.2□□□□□ -0.62
PTPRK-205ENST00000368213 AKAP7Q9P0M2 348 aaPredicted RBP11.2□□□□□ -0.62
PTPRK-205ENST00000368213 ANO9A1A5B4 782 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 RASA4BC9J798 803 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 RASA4O43374 803 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 PTPN11Q06124 597 aaPredicted RBP11.2□□□□□ -0.62
PTPRK-205ENST00000368213 NAPEPLDQ6IQ20 393 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 ZPBP2Q6X784 338 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 NT5DC4Q86YG4 428 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 RSRC1Q96IZ7 334 aaKnown RBP11.2□□□□□ -0.62
PTPRK-205ENST00000368213 DCLK3Q9C098 648 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 CISHQ9NSE2 258 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.2□□□□□ -0.62
PTPRK-205ENST00000368213 NOVA2Q9UNW9 492 aaKnown RBP11.2□□□□□ -0.62
PTPRK-205ENST00000368213 SLITRK3O94933 977 aa11.2□□□□□ -0.62
PTPRK-205ENST00000368213 PBLDP30039 288 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms