RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 CGRRF1Q99675 332 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 MRIQ9BWK5 157 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 CACYBPQ9HB71 228 aaKnown RBP13.83□□□□□ -0.2
PTPRK-204ENST00000368210 A1CFQ9NQ94 594 aaKnown RBP13.83□□□□□ -0.2
PTPRK-204ENST00000368210 TRAPPC3O43617 180 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 NPTXRO95502 500 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 SYF2O95926 243 aaKnown RBP13.83□□□□□ -0.2
PTPRK-204ENST00000368210 EVX2Q03828 476 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 MEA1Q16626 185 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 BOLA3Q53S33 107 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 MPZL3Q6UWV2 235 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 NIPA1Q7RTP0 329 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 ATXN7L3BQ96GX2 97 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 C3P01024 1663 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 FRMPD4Q14CM0 1322 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 VWA5AO00534 786 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 SLC12A3P55017 1021 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 ZNF200P98182 395 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-204ENST00000368210 GOLGA7BQ2TAP0 167 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 SV2CQ496J9 727 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 FKBP1CQ5VVH2 108 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 PTF1AQ7RTS3 328 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 DTX3LQ8TDB6 740 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 ATG4AQ8WYN0 398 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 SH3GL1Q99961 368 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 SLC38A7Q9NVC3 462 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 PRKAG2Q9UGJ0 569 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 POLIQ9UNA4 740 aa13.83□□□□□ -0.2
PTPRK-204ENST00000368210 CCDC22O60826 627 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 SOX10P56693 466 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 YWHAHQ04917 246 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-204ENST00000368210 SPATA2LQ8IUW3 424 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-204ENST00000368210 ACSF2Q96CM8 615 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-204ENST00000368210 UPF3AQ9H1J1 476 aaKnown RBP13.82□□□□□ -0.2
PTPRK-204ENST00000368210 ANKZF1Q9H8Y5 726 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 TRIM33Q9UPN9 1127 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 SLC8A2Q9UPR5 921 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 ATP4AP20648 1035 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 SERPINB1P30740 379 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 DSG3P32926 999 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 GNL1P36915 607 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-204ENST00000368210 GRIK1P39086 918 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 SERPINB8P50452 374 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 CACNB2Q08289 660 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-204ENST00000368210 KIF19Q2TAC6 998 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 FOXR1Q6PIV2 292 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 NDUFAF2Q8N183 169 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 AKT1S1Q96B36 256 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 GGT7Q9UJ14 662 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 C2CD2Q9Y426 696 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 C3orf70A6NLC5 250 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-204ENST00000368210 SPAG6O75602 509 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 CYP3A4P08684 503 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 PGM1P36871 562 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 SERPINB10P48595 397 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 ITIH4Q14624 930 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 TMEM259Q4ZIN3 620 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 DCAF6Q58WW2 860 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 ZNF484Q5JVG2 852 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 HAS1Q92839 578 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 SPATA17Q96L03 361 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 MROH8Q9H579 483 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 SMYD3Q9H7B4 428 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 SYNPO2Q9UMS6 1093 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 KDM4FA0A1W2PPD8 638 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 KLRC4O43908 158 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 PYGBP11216 843 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 ITGA4P13612 1032 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 PCSK1P29120 753 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 ZNF157P51786 506 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-204ENST00000368210 RABGAP1LQ5R372 815 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 METTL7BQ6UX53 244 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 KIF2BQ8N4N8 673 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 WWP1Q9H0M0 922 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTPRK-204ENST00000368210 SUN2Q9UH99 717 aa13.82□□□□□ -0.2
PTPRK-204ENST00000368210 IFT172Q9UG01 1749 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 ZBTB39O15060 712 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 ADARP55265 1226 aaKnown RBP13.81□□□□□ -0.2
PTPRK-204ENST00000368210 EFHC1Q5JVL4 640 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 YTHDF3Q7Z739 585 aaKnown RBP13.81□□□□□ -0.2
PTPRK-204ENST00000368210 FUKQ8N0W3 1084 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 FAM71DQ8N9W8 422 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 DNERQ8NFT8 737 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 DDI1Q8WTU0 396 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 MTFR1LQ9H019 292 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 KCNMB3Q9NPA1 279 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 DPP3Q9NY33 737 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 FUT2Q10981 343 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 ADRM1Q16186 407 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 CNGA3Q16281 694 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 MTHFD1LQ6UB35 978 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 FBXO16Q8IX29 292 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-204ENST00000368210 LRRN4CLQ8ND94 238 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 FBXO25Q8TCJ0 367 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 ADARB2Q9NS39 739 aaKnown RBP13.81□□□□□ -0.2
PTPRK-204ENST00000368210 INTS13Q9NVM9 706 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 UBQLN1Q9UMX0 589 aaKnown RBP13.81□□□□□ -0.2
PTPRK-204ENST00000368210 MON2Q7Z3U7 1717 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 FGRP09769 529 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms