RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 CCDC170Q8IYT3 715 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 PDCL2Q8N4E4 241 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 UBR7Q8N806 425 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 KREMEN2Q8NCW0 462 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 OR6B3Q8NGW1 331 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 EPS8L1Q8TE68 723 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 RABGGTAQ92696 567 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 TNIP3Q96KP6 325 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 SUSD3Q96L08 255 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 CCDC42Q96M95 316 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 RIPOR3Q96MK2 946 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 ZNF558Q96NG5 402 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 NT5C1AQ9BXI3 368 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 SDCBP2Q9H190 292 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 POMKQ9H5K3 350 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 HAUS4Q9H6D7 363 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 MARCH5Q9NX47 278 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 DNAJB4Q9UDY4 337 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 PUF60Q9UHX1 559 aaKnown RBP7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 ADAM28Q9UKQ2 775 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 PCDHB8Q9UN66 801 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 L1RE1Q9UN81 338 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 RWDD3Q9Y3V2 267 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 PLXNA3P51805 1871 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 KMT2EQ8IZD2 1858 aa7.21□□□□□ -1.26
RNU1-55P-201ENST00000365510 SOWAHDA6NJG2 315 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 A8MXQ7 604 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 M0QZQ0 153 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 NRP1O14786 923 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 THAP12O43422 761 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 MED7O43513 233 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 AKR1B10O60218 316 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 CLASP2O75122 1294 aaKnown RBP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 CXCL14O95715 111 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 CYP11A1P05108 521 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 FAM163BP0C2L3 166 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 SKILP12757 684 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 CYP11B1P15538 503 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 EPCAMP16422 314 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 TYMPP19971 482 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 PCSK1P29120 753 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 BRCC3P46736 316 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 LHX1P48742 406 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 KIF11P52732 1056 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 NDST1P52848 882 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 PTPN5P54829 565 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 CDH8P55286 799 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 CCZ1BP86790 482 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 CCZ1P86791 482 aaPredicted RBP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 YWHAHQ04917 246 aaPredicted RBP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 MAPK8IP2Q13387 824 aaPredicted RBP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 ZNF394Q53GI3 561 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 RARS2Q5T160 578 aaKnown RBP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 WSCD1Q658N2 575 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 HGSNATQ68CP4 663 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 OVOS1Q6IE37 1185 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 FUT10Q6P4F1 479 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 WDR59Q6PJI9 974 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 TRIM72Q6ZMU5 477 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 TMC7Q7Z402 723 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 LIMS2Q7Z4I7 341 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 IRF2BP2Q7Z5L9 587 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 ZNF677Q86XU0 584 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 TMEM139Q8IV31 216 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 BCL7CQ8WUZ0 217 aaPredicted RBP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 TMEM169Q96HH4 297 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 TMEM176AQ96HP8 235 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 TCF25Q9BQ70 676 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 MRPL45Q9BRJ2 306 aaKnown RBP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 KCNF1Q9H3M0 494 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 NHEJ1Q9H9Q4 299 aaPredicted RBP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 LUC7LQ9NQ29 371 aaKnown RBP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 SEPT11Q9NVA2 429 aaKnown RBP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 DDX43Q9NXZ2 648 aaKnown RBP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 ARHGAP20Q9P2F6 1191 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 STK39Q9UEW8 545 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 HMGXB4Q9UGU5 601 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 CNTN6Q9UQ52 1028 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 CEP83Q9Y592 693 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 PCDHB12Q9Y5F1 795 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 CFAP54Q96N23 3096 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 DOCK6Q96HP0 2047 aa7.2□□□□□ -1.26
RNU1-55P-201ENST00000365510 USP34Q70CQ2 3546 aa7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 FAM186AA6NE01 2351 aa7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 C2orf71A6NGG8 1288 aa7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 F8W810 466 aa7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 I3L4J1 428 aa7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 PLEKP08567 350 aaPredicted RBP7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 CD19P15391 556 aa7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 BRD2P25440 801 aaKnown RBP7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 TKTP29401 623 aaKnown RBP7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 CLCN1P35523 988 aa7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 GNL1P36915 607 aaPredicted RBP7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 EIF4A3P38919 411 aaKnown RBP7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 RAD23BP54727 409 aa7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 TSPY1Q01534 308 aa7.19□□□□□ -1.26
RNU1-55P-201ENST00000365510 CDR2Q01850 454 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms