RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TOP3BO95985 862 aaKnown RBP11.12□□□□□ -0.63
SMC3-201ENST00000361804 TPBGLP0DKB5 382 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 GCKP35557 465 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 YARSP54577 528 aaKnown RBP11.12□□□□□ -0.63
SMC3-201ENST00000361804 MMRN1Q13201 1228 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 OASLQ15646 514 aaKnown RBP11.12□□□□□ -0.63
SMC3-201ENST00000361804 SNRNP48Q6IEG0 339 aaKnown RBP11.12□□□□□ -0.63
SMC3-201ENST00000361804 DNAJC24Q6P3W2 148 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 MCF2L2Q86YR7 1114 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 FBXO27Q8NI29 283 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 MAIP1Q8WWC4 291 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 CPT1BQ92523 772 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 NTPCRQ9BSD7 190 aaKnown RBP11.12□□□□□ -0.63
SMC3-201ENST00000361804 LRMDAQ9H2I8 198 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 PARVAQ9NVD7 372 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 STK32BQ9NY57 414 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 AGTPBP1Q9UPW5 1226 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 ZNF638Q14966 1978 aaKnown RBP11.12□□□□□ -0.63
SMC3-201ENST00000361804 CCDC189A1A4V9 331 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 F5H423 210 aaPredicted RBP11.12□□□□□ -0.63
SMC3-201ENST00000361804 CSDE1O75534 798 aaKnown RBP11.12□□□□□ -0.63
SMC3-201ENST00000361804 MYCNP04198 464 aaPredicted RBP11.12□□□□□ -0.63
SMC3-201ENST00000361804 PTPRAP18433 802 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 MMP8P22894 467 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 CDKN2BP42772 138 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 CDH8P55286 799 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 BASP1P80723 227 aaKnown RBP11.12□□□□□ -0.63
SMC3-201ENST00000361804 PSMD6Q15008 389 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 HIF1AQ16665 826 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 EEPD1Q7L9B9 569 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 ZC3H18Q86VM9 953 aaKnown RBP11.12□□□□□ -0.63
SMC3-201ENST00000361804 MAB21L3Q8N8X9 362 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 CEP120Q8N960 986 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 TTC17Q96AE7 1141 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 NAF1Q96HR8 494 aaKnown RBP11.12□□□□□ -0.63
SMC3-201ENST00000361804 TCHPQ9BT92 498 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 TXLNGQ9NUQ3 528 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 POLIQ9UNA4 740 aa11.12□□□□□ -0.63
SMC3-201ENST00000361804 SPDYE5A6NIY4 337 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 GNAZP19086 355 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 GMPSP49915 693 aaPredicted RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 VCPP55072 806 aaKnown RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 PYROXD1Q8WU10 500 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 HSPH1Q92598 858 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 RNPEPL1Q9HAU8 725 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 MRPL47Q9HD33 250 aaKnown RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 JPH1Q9HDC5 661 aaPredicted RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 NXF1Q9UBU9 619 aaKnown RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 PDCD11Q14690 1871 aaKnown RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 CCDC195A0A1B0GUA6 201 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 K7ERI5 159 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 FAM189A1O60320 539 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 PTDSS1P48651 473 aaKnown RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 DENND1BQ6P3S1 775 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 VSIG10LQ86VR7 867 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 UCMAQ8WVF2 138 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 SERAC1Q96JX3 654 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 FAM111AQ96PZ2 611 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 OSBPL1AQ9BXW6 950 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 HEY2Q9UBP5 337 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 SMNDC1O75940 238 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMC3-201ENST00000361804 KRT36O76013 467 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 TJP3O95049 919 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 BGNP21810 368 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 MARK3P27448 753 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 SERPINB3P29508 390 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 RPL22P35268 128 aaKnown RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 MKRN3Q13064 507 aaKnown RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 ACVR2BQ13705 512 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 NIPA1Q7RTP0 329 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 CLNKQ7Z7G1 428 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 ZNF276Q8N554 614 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 CCHCR1Q8TD31 782 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 PPP1R16BQ96T49 567 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 MARCOQ9UEW3 520 aaPredicted RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 EVPLQ92817 2033 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 CNTNAP2Q9UHC6 1331 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 PLXNB2O15031 1838 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 CD19P15391 556 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 GARTP22102 1010 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 CTC1Q2NKJ3 1217 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 ANO7Q6IWH7 933 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 PRPF39Q86UA1 669 aaKnown RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 PHF13Q86YI8 300 aaPredicted RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 MICALL2Q8IY33 904 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 WDR60Q8WVS4 1066 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 PCYT2Q99447 389 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 PLCD4Q9BRC7 762 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 CADM1Q9BY67 442 aaKnown RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 PSMC3IPQ9P2W1 217 aaPredicted RBP11.11□□□□□ -0.63
SMC3-201ENST00000361804 IP6K2Q9UHH9 426 aa11.11□□□□□ -0.63
SMC3-201ENST00000361804 ALOX15BO15296 676 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 GRAP2O75791 330 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 DGAT1O75907 488 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 LINGO3P0C6S8 592 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 KITP10721 976 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 SFNP31947 248 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 PCK1P35558 622 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 PRKG1Q13976 671 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 TFDP3Q5H9I0 405 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms